Gene
RNA
| Item | Value |
|---|---|
| gene id | G73223 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000012 |
| NCBI id | null |
| chromosome length | 13770000 |
| location | 7259826 ~ 7260038 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU83482 | True | 213 | lncRNA | 0.37 | 1 | 7259826 | 7260038 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000012_07136101_07161117 | RRBP1A, RRBP1 | coding | upstream | 98278 | 7136017 ~ 7161548 (+) |
| CI01000012_07120539_07126148 | SNX5 | coding | upstream | 133554 | 7120539 ~ 7126272 (+) |
| CI01000012_07111569_07113225 | NA | coding | upstream | 146594 | 7111569 ~ 7113232 (+) |
| CI01000012_07108281_07109521 | NA | coding | upstream | 149904 | 7108281 ~ 7109922 (+) |
| CI01000012_07104155_07105373 | NA | coding | upstream | 154246 | 7104062 ~ 7105580 (+) |
| CI01000012_07312430_07315865 | BTBD6A | coding | downstream | 51634 | 7311672 ~ 7315917 (+) |
| CI01000012_07348648_07352865 | NA | coding | downstream | 88610 | 7348648 ~ 7353209 (+) |
| CI01000012_07359292_07362314 | NA | coding | downstream | 98677 | 7358715 ~ 7362378 (+) |
| CI01000012_07401962_07405598 | NUSAP1 | coding | downstream | 141924 | 7401962 ~ 7405598 (+) |
| CI01000012_07409605_07427042 | RTF1 | coding | downstream | 148954 | 7408992 ~ 7427309 (+) |
| G73150 | NA | non-coding | upstream | 28383 | 7231186 ~ 7231443 (+) |
| G72757 | NA | non-coding | upstream | 172205 | 7074666 ~ 7087621 (+) |
| CI01000012_06826817_06842273 | NA | non-coding | upstream | 417402 | 6825923 ~ 6842529 (+) |
| CI01000012_06441231_06476986 | KIF16BB | non-coding | upstream | 663309 | 6441192 ~ 6477104 (+) |
| G72760 | NA | non-coding | upstream | 698215 | 6557200 ~ 6561611 (+) |
| G73224 | NA | non-coding | downstream | 822 | 7260860 ~ 7261065 (+) |
| G73253 | NA | non-coding | downstream | 78732 | 7338770 ~ 7338975 (+) |
| G73254 | NA | non-coding | downstream | 84557 | 7344595 ~ 7344915 (+) |
| G73181 | NA | non-coding | downstream | 85468 | 7345506 ~ 7345781 (+) |
| G73255 | NA | non-coding | downstream | 87612 | 7347650 ~ 7347902 (+) |
| CI01000012_05923216_05928055 | SRD5A2B | other | upstream | 1335521 | 5922385 ~ 5929186 (+) |
| G71623 | NA | other | upstream | 1443221 | 5813517 ~ 5816605 (+) |
| G71548 | NA | other | upstream | 1698393 | 5550493 ~ 5561433 (+) |
| G71221 | NA | other | upstream | 1719370 | 5538525 ~ 5540456 (+) |
| G71218 | NA | other | upstream | 1721442 | 5535852 ~ 5538384 (+) |
| CI01000012_07806089_07811902 | BEND3 | other | downstream | 546065 | 7805248 ~ 7811902 (+) |
| G73578 | NA | other | downstream | 1106768 | 8366806 ~ 8367627 (+) |
| CI01000012_10223957_10235955 | NA | other | downstream | 2961917 | 10223697 ~ 10236276 (+) |
| G75533 | NA | other | downstream | 3884779 | 11144817 ~ 11145739 (+) |
| G76385 | NA | other | downstream | 5370717 | 12630755 ~ 12675666 (+) |
