Fish Transcriptome and Expression Database

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ornamental fish

G228884

Basic Information

Item	Value
gene id	G228884
gene name	NA
gene type	non-coding
species	mexican tetra (Astyanax mexicanus)
category of species	ornamental fish

Chromosome Information

Item	Value
chromosome id	NW_019170698.1
NCBI id	APWO02000296.1
chromosome length	197774
location	134220 ~ 134445 (+)
genome version	Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU311111
ctcagatgttatatttagtttttttacggAAGCAAAAGGCATCAGGGATGGTCTCGGCCcaaaataacattaacattcCACCCCAAATTAACTTActtaagaaaacaaagaaaataaaatacaataacaaaACCTAACTCCCTAACAAAAACATAGACAACATCCCAAAATAAATAGGCTACACCCCCTACAGCTTCCAAGCTAAAAAGGTTTAAACAGTTTACAT

Function

GO: NA

KEGG: NA

RNA

RNA id	representative	length	rna type	GC content	exon number	start site	end site
TU311111	True	226	lncRNA	0.34	1	134220	134445

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.

Neighbor

gene id	symbol	gene type	direction	distance	location
G228876	NA	non-coding	upstream	19256	113842 ~ 114964 (+)
G228887	NA	non-coding	downstream	18776	153221 ~ 153476 (+)
G228892	NA	other	downstream	25464	159909 ~ 160414 (+)

Expression

Co-expression Network