LOC103028116


Basic Information

Item Value
gene id LOC103028116
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019170901.1
NCBI id APWO02000499.1
chromosome length 310558
location 20689 ~ 22569 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU320439
GACTGATCTGAGTGTAGATCCAGATTACTCAGGCAGGGTTGAGTGTTTAACTGATAAGAAAACGTACTACTCTCTCAAACTGAGTAACGTAACGAAGAAGGATGAACACGAGTACAACTTCAGAATCAAAGCAGATGATGATAAAAAGAAATGGATAGGAAAAGATAATTTCATTCTCAAAGTTACTGGTGAGTTACGAAGTAATATGACttactgattaaatatgtattacaGATGTAAATGTTTCTAGACTTTAAAGATttcagtaaaaagaaaaataatttaatgaccCTTTAAATTCTCTCCTTGTCTCAGATCTCCATGTAGAATCTCCTGGAGAAGTAACAGAAGGAGAATCAGCAGTTCTGACGTGTAAAACCACCTGCAGTCTGACTGATCCAACATTCATCTGGTACAAAGATGGACGTCCTTTAACCACAGAGATGATCCAGAAGAATCAGCAGCTCCACCTGCAGACAGTCAGCAGTGAGGATGCAGGCAGTTATAGCTGTGCTGTAAGAGGATCTGAACATCTCCCCTCTACTGCTCAAACTCTCAGAGTCAGACATCCTCCAAAGAGCGTCTCAGTGTCCATCAGTCCCTCTGGTGGAATAGTGGAGGGAAGTTCAGTGACTCTGACCTGCAGCAGTGATGGAGACCCACCTGTGGAGATCTACACCTGGTTTAAAGGATCATCATCAGTAGGAACAGGAGGAACCTACAGCATTCCCAACATCAGCTCTGAGGACAGTGGAGAATACACATGCCAGAGTCGTAAT
>XM_022686044.1
aatgaccCTTTAAATTCTCTCCTTGTCTCAGATCTCCATGTAGAATCTCCTGGAGAAGTAACAGAAGGAGAATCAGCAGTTCTGACGTGTAAAACCACCTGCAGTCTGACTGATCCAACATTCATCTGGTACAAAGATGGACGTCCTTTAACCACAGAGATGATCCAGAAGAATCAGCAGCTCCACCTGCAGACAGTCAGCAGTGAGGATGCAGGCAGTTATAGCTGTGCTGTAAGAGGATCTGAACATCTCCCCTCTACTGCTCAAACTCTCAGAGTCAGACATCCTCCAAAGAGCGTCTCAGTGTCCATCAGTCCCTCTGGTGGAATAGTGGAGGGAAGTTCAGTGACTCTGACCTGCAGCAGTGATGGAGACCCACCTGTGGAGATCTACACCTGGTTTAAAGGATCATCATCAGTAGGAACAGGAGGAACCTACAGCATTCCCAACATCAGCTCTGAGGACAGTGGAGAATACACATGCCAGAGTCGTAATCAACTCGGAGAGGGAAGATCCACTGCTGTCTCTTTAAATGTTCTGTATCCTCCAAGGGACGTCTCAGTGTCCAATAGTTCCTCTGGTGAAATGGTGAATCTGACCTGTAGCAGTGATGCTAACCCACCTGTGGAGATCTACACCTGGTTTAAAGATGGTGGAGACTCACCTGTAGGATCTGGACACAGTTATGTTCCTCTACAGAGTGGATTCTACTACTGCCAGGCTCAGAACCAACATGGAGCTCAGAGATCAGCTGCTGTACCGGTTAATATCAATGGTGAGAGACTTAATTATATAGATTGACCCTCTTATTTCtgtaatatatgtatgtgtaataTCTCAGCAGGACTCTGGGTGGCGCTGTATGCAGTTGGTGGAGTGGTTGGAGTTGGTGGGCTTGCAGCTTTTCTTACTGGACTTTTCTGGATGAGGAGACGGAAGAAGCAGGATGTGAATACGGATGAGGACATCTACCAGAATGTTGGAGATATCTCTTGTCCTCCTGATGAAGACTCCTCCAGTACTCATGTTTATGGGAATGTAGAGGTGAGTTTTCATTACTGGGTTTTTATAATACGTATTTAGAGCATCTGCTGATGTTCTCTGTCTCTCGGTTCTGCAGGATGTTGGAGATAAAGCTCATCCtcctgatgatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320439 False 779 TUCP 0.42 2 20689 21567
XM_022686044.1 True 1155 mRNA 0.46 5 20973 22569

Neighbor

gene id symbol gene type direction distance location
LOC103027463 NA coding downstream 54322 76891 ~ 84811 (+)
LOC111196691 NA coding downstream 66994 89563 ~ 94700 (+)
LOC111196684 NA coding downstream 73138 95707 ~ 102694 (+)
LOC111196693 NA coding downstream 83633 106202 ~ 113408 (+)
LOC111196685 NA coding downstream 98431 121000 ~ 130341 (+)
G235490 NA non-coding downstream 53848 76417 ~ 89404 (+)
G235498 NA non-coding downstream 121031 143600 ~ 154653 (+)
G235508 NA non-coding downstream 121778 144347 ~ 145195 (+)
G235513 LOC108271652 non-coding downstream 138346 160915 ~ 167623 (+)
G235510 NA non-coding downstream 154369 176938 ~ 202618 (+)
LOC111196687 NA other downstream 170292 192861 ~ 194963 (+)

Expression


Co-expression Network