G235526


Basic Information

Item Value
gene id G235526
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019170901.1
NCBI id APWO02000499.1
chromosome length 310558
location 231549 ~ 232370 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU320529
GTTCACTGTCCACGCAACCAAATACGCTCTCAACTTCTTCAACTACATCAACTTCATCTCATGCAACAGATTCTCATCCTACTCCATCACCAACATCAACATGCAAGGGTTCAGTGGCCACAAAACCGAATACACTCTCGTCCTCATCTCATACTACACCATTACCAACACGCACAGGTTCAGTGACCACACTGTCAACCACTTCAACTACATCAACTCCATCTAATGCAACAGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU320529 True 236 lncRNA 0.45 2 231549 232370

Neighbor

gene id symbol gene type direction distance location
LOC111196688 NA coding upstream 1566 226849 ~ 229983 (+)
LOC111196692 NA coding upstream 6781 217813 ~ 224768 (+)
LOC103027884 NA coding upstream 15180 211904 ~ 216369 (+)
LOC103028199 NA coding upstream 22680 200640 ~ 208869 (+)
LOC103028511 NA coding upstream 53771 162608 ~ 177778 (+)
LOC111196689 NA coding downstream 9945 242315 ~ 261740 (+)
LOC103025438 NA coding downstream 39329 271699 ~ 275746 (+)
LOC111196690 NA coding downstream 52700 285070 ~ 293691 (+)
G235510 NA non-coding upstream 28931 176938 ~ 202618 (+)
LOC111196695 LOC108271652 non-coding upstream 32708 195395 ~ 198841 (+)
G235513 LOC108271652 non-coding upstream 63926 160915 ~ 167623 (+)
G235498 NA non-coding upstream 76896 143600 ~ 154653 (+)
G235508 NA non-coding upstream 86354 144347 ~ 145195 (+)
G235527 NA non-coding downstream 98 232468 ~ 234112 (+)
G235593 NA non-coding downstream 13045 245415 ~ 245619 (+)
G235600 NA non-coding downstream 56191 288561 ~ 291723 (+)
LOC111196687 NA other upstream 36586 192861 ~ 194963 (+)
LOC103028116 NA other upstream 208980 20689 ~ 22569 (+)

Expression


Co-expression Network