LOC111196684


Basic Information

Item Value
gene id LOC111196684
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019170901.1
NCBI id APWO02000499.1
chromosome length 310558
location 95707 ~ 102694 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022686045.1
ATGTTTGAGGGCGCTATGGAGCTCCTGAACCACGCCAAAGTCCAGCCTCTATGgaacttttacattttcaccAAGTTAGGGGCCTTTGTAAACAGTATGGTGAATAAAGagattaaagtaacaaatacaGAGCACAACACTGTTGTGATTGTGTGTCCGTATACTGAAGGATATGAAGATTATCCTAAATACTTCTGTAAGGGATTCTATAGAGACTGTAGAAACATTATAAAGACTGATGGGAAGGAGAGGTGGAAATATGAAGGAAGATTCTCTCTGGTTGACGACACTGATAAGAAAAAAATTGTGGTGGCCATCCGCAACCTCAGCATGAAGGATGCAGGACCATACGGATGTGGAATTGAGATAACAGGACCAGATCCATTTACTGTAGTCTATCTGACTGTGAATAAGGGTAAGTCTCTtagcttctttttcttttataccactgacatgccaaaaggtcttgtgtcccatgacttttggcatgccccACTGGAGGCTAAAGGATGccacactgacctgtgggactTAAAGTCTGGTCAAAATAAACATGCTCAACCTCGCTCAAAAGCTAGAATCTCACAACTTTGTGTAACACTTTATGATCGATCAGCTCCTAAACCTCCAAAACCTCAAAAACCCCACCAAACACCCACAACTACTGCCAAAACCTCCACCCAAACTCAACCAAAATGCTGTACTCATTCTCCAACAGagtCCCCCATGGCAACAGTGACTAACCGAACAGGAAGTGAAACAGGGGTCACAGGAAGCTCCTCTCCGCCGCTGCCCACAAAAAATGATGCAGATCTCATCAGTGCTGTAGGAGCCGTCAGTGGAGTCCTGCTGATGCTGGCAGTAATATCTGCAATTTTCTATGTCTTCAGATGCAAACCAGGGAAGAATGAAACAGATCATGTGCACTCAGAGGTGGACAATGAGgATGTTCGCTTGTATGAGGAGATACAGCCCTCCAATCCTACGCAAGACGCCGACACAATCTccaccaatcagaaccctcgTCCAGCATGTATCACCATATACTCCTCAATAACAAATCCAACCCCTGAATTACACTCTGAATACACACTGGCTACAAATCCTAAACCAATTACAGACTCCAGCCAATCCGACCAAAGCTCAAACGACCCaaactacagtaaaatatatttcattaacAACAAAACTTCAGATTCTACAGTGAGTTGCAACGATACGACATATTCAACTGttcaaaaagtcttaaaagatTAAAACTGAACAACTAAATCTTAGCTGACTGTAGTTCAGATTAATCCACTATTGGATTTTCACAAAATTaattaaccctctatggcatgaattttatatttcttaagaAAAATAATGATAGCCACCACTGCATTAGCTTTATTAGAAT

Function

GO: NA

KEGG:

id description
K20395 CD300B_D_F; CO300B/D/F antigen

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022686045.1 True 1402 mRNA 0.42 9 95707 102694

Neighbor

gene id symbol gene type direction distance location
LOC111196691 NA coding upstream 1007 89563 ~ 94700 (+)
LOC103027463 NA coding upstream 10896 76891 ~ 84811 (+)
LOC111196693 NA coding downstream 3508 106202 ~ 113408 (+)
LOC111196685 NA coding downstream 18306 121000 ~ 130341 (+)
LOC111196686 NA coding downstream 53352 156046 ~ 161475 (+)
LOC103028511 NA coding downstream 59914 162608 ~ 177778 (+)
LOC103028199 NA coding downstream 97946 200640 ~ 208869 (+)
G235490 NA non-coding upstream 6303 76417 ~ 89404 (+)
G235498 NA non-coding downstream 40906 143600 ~ 154653 (+)
G235508 NA non-coding downstream 41653 144347 ~ 145195 (+)
G235513 LOC108271652 non-coding downstream 58221 160915 ~ 167623 (+)
G235510 NA non-coding downstream 74244 176938 ~ 202618 (+)
LOC111196695 LOC108271652 non-coding downstream 92701 195395 ~ 198841 (+)
LOC103028116 NA other upstream 73138 20689 ~ 22569 (+)
LOC111196687 NA other downstream 90167 192861 ~ 194963 (+)

Expression


Co-expression Network