LOC111196686


Basic Information

Item Value
gene id LOC111196686
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019170901.1
NCBI id APWO02000499.1
chromosome length 310558
location 156046 ~ 161475 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022686047.1
ATCTGTAAAACTGAACTCAGGATGAAGATCCTCCTCATCTTCACCCTCTACCTGATCTCAGGGGGTGAAGCCTCCAGTGAAGTGAGGGGATATTCAGGAGGAGGAGTTCTCATCAAGTGTAAATATGATAGAGAATACACATCAAACAAAAAGTACTTCTGTAAGGACTCACGGCCGAACTGTGATGACCTGATCAAGACAGATGCTAAAGATAAATGGGTCAATATAGGAAGATTCTCACTGATTGATAAACCCAGCTCTGCAGAGTTCTGGGTGATGATCAGAGAACTCACTGTAGAAGATTCTGGGATGTACCAGTGCGGAGTTGATAGAGAAAATCGGCTAGACAAAAGCACAAAAGTGGAACTGAAGATACATGAAggtaacacaataaaaataatgaattatgttatttttagcAGTGGTAGGGTTATTGTTTGCTATCTAGGCTATAAGAGGAGCATCAGTGTGAAAGGTCATGTAGGACAAACAGTGAAAATCACCTGCAATTACCCACAATCCCTCATCAGTAAACCCAAGTTCCTCTGTATGAGATGGAGCACTGCTGACTGTTATTATACAGCATCTGTTAAAGAGAGTAAAAGACGGATAAAGGAGGGAAGAGTCTCTCTGTATGACGACAGAGCAAAGAAGATCTTCACAGTGAGCATCAGCAGTGTGACTGAGGGAGATTCTGGTGAATACTGGTGTGGAGCTGAATCAGACTGGGAATCTGATCACGgatacaagatttatttcacaCAGGTTAACCTCGCAGTTACTGAACCAGAAGGACAAGATATGACTCCACACTCTCCACCATTAAGCTCTACTCCACAGAACACAGAGGAAACCACAACATCCTCAACTGAGTCAAATGAACAAACAGCACTAGTGTTTCGTGTTGTGATTCCTGTAGTATCTGTGGTTCTGGTGCTGTTTCTGAGTGCACTCTTATTCTTCATATTCGCTCTCAGAAAGAGAAGACAAACTTCAGGATCAGAAAGAGTCACACAATCTTCCAAAAATGACGATTATGAAAATGATGCAGACTTGTTTCGTCTTCAGACAAGAAGTTGTggcaaccaatcagattcagtttacCAGAGCctcaaccccaacaccaacaatcagattcagtctaattcagtttacCAGAGCCTGaatcccaacaccaaccaatcagattcagtttacCAGAGCCTGaatcccaacaccaaccaatcagattccgTCTACCAGAGCCTGAATCCCAACAACTACCAATCATATTTAGTCTACCAGAGCctcaaccccaacaccaaccaatcagattctgtCTTCTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022686047.1 True 1326 mRNA 0.42 9 156046 161475

Neighbor

gene id symbol gene type direction distance location
LOC111196685 NA coding upstream 25705 121000 ~ 130341 (+)
LOC111196693 NA coding upstream 42638 106202 ~ 113408 (+)
LOC111196684 NA coding upstream 53352 95707 ~ 102694 (+)
LOC111196691 NA coding upstream 61346 89563 ~ 94700 (+)
LOC103027463 NA coding upstream 71235 76891 ~ 84811 (+)
LOC103028511 NA coding downstream 1133 162608 ~ 177778 (+)
LOC103028199 NA coding downstream 39165 200640 ~ 208869 (+)
LOC103027884 NA coding downstream 50429 211904 ~ 216369 (+)
LOC111196692 NA coding downstream 56338 217813 ~ 224768 (+)
LOC111196688 NA coding downstream 65374 226849 ~ 229983 (+)
G235498 NA non-coding upstream 1393 143600 ~ 154653 (+)
G235508 NA non-coding upstream 10851 144347 ~ 145195 (+)
G235490 NA non-coding upstream 66642 76417 ~ 89404 (+)
G235510 NA non-coding downstream 15463 176938 ~ 202618 (+)
LOC111196695 LOC108271652 non-coding downstream 33920 195395 ~ 198841 (+)
G235526 NA non-coding downstream 70074 231549 ~ 232370 (+)
G235527 NA non-coding downstream 70993 232468 ~ 234112 (+)
G235593 NA non-coding downstream 83940 245415 ~ 245619 (+)
LOC103028116 NA other upstream 133477 20689 ~ 22569 (+)
LOC111196687 NA other downstream 31386 192861 ~ 194963 (+)

Expression


Co-expression Network