LOC111196693


Basic Information

Item Value
gene id LOC111196693
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019170901.1
NCBI id APWO02000499.1
chromosome length 310558
location 106202 ~ 113408 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022686063.1
CTCTGTATGTATCTGCCCAAAATCTAACCACTCCCATTTAGAGAGACTTCCACTTCCACTCTTACTCACTTCCTATCTCCTCATACAAACAACCCTCTCCTGACCCCCACCTGATCATCTTACTCTCCTCTCGTATTGTCTAGAGAAAAGAAGAACCATAAATGTGTCTGGTTGTGGTTCCATTCTGTGTGAGCACATTCTGATTTTAAGCTGTCTAGCACATTTGGTTTGATATCCAGGCGCGAGTATGAACATCACGGCGGTGGCTTTCACACTTCTTGCAGGTTTGATCTGTGTAACGTCTGCAGGAATCAGAGTGAAAGCACCTCTAGGAGGAAACGCTACTGTCGTCTGTCCGTATCAGAAAGGAAGCGAGAGGTACCCGAAATACTTCAGCAAACAGAGACCTGGAGACAGAATTGAGATTGCGAGATCAAACTGGTTCAGAACCAGGTCTACTGACGGTAGATTCTCTCTGCAGGACGACCGAGAGAGATCAGAGTTCACTGTGATCATCAGGAACCTCAGTGTAGAAGATGCTGGTCTGTACTGGTGTGGAGTAGACTGGTGGGTGTGGTCAGATGAGCTCACAGAGGTCAACCTGGACGTAGTGCAAGAAATTTCACATACTTCACCAACGTTCGGCCCCCAGAATGCTTCTCCATCCGAATTAATGCAGACAGAACCACATCCCTTACTGACACAAGACAAGATACCTGTCACAGATCAGTCTATGAATCTGGGGGTGTCCCTGGCTGTAGTTGTGCTGTTGTGTGGAATTATGACCGTcatttttattctgattaagAAGAACAATGCAAAGCGTTCAACAgACTTTTCTCAACCAAGGATTTGCACACAGTCGAACAGGGATACCTGTATCTATGAGGAAATCAGCCCATCAGACACCTGTTCTTCAACAAACACCACCCGTAGACCAGGCTTAGCCCTGAGCGACAGCACAGCAACGTACTCTACTCAGTCTGTCCTAAAACCTTCGGCACAGAGCCAAGTCCCGCATCCTGAGTCCGTGGTTTACTCCGTTATTACCAGACCCAAGAAGCTCCGAGATGATGCAACACCTCCCCCCTTCAGCAGAACCAGCTTCCCTTTACTCAGCTGTGAACACTGTGCagagttcagtcagagagagctCTGCCTGTGCTGGAAACTCGCGTGATGTCTATACCGTCATCCAGTTACACTGTGACTATGAAAGATCTGCTATTGGTCAGTAGATGGCATCAGTGAGCTATGATGAGACAGATCCCCATGATTCAGGGCCTCTGTGACTCACAGTTTAACTCCTAAACAGACCTTGGCCTGTATGGAGAAGCTGAATGTTGACTCTGTAATCTTAATACTCTTAATAATTTTAGATCAGTTTTAAGAAGAATCaaccccaaattctgcatgataaaaaaaaactagtcaATCGTAACAGAATTAaaagtttggaggacatgaaaatattgattttgaacTGTTAGAAGTTCAGGGAAGTgccaattttattatttttattcattataatttaattttgggGTAATTAGAAATAGTTGGATTTCCCCCTCCAAAAaaatatcactgaaaaaaagcagaaattgtttcaGAATAAACTCTTATTTTGCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022686063.1 True 1634 mRNA 0.44 6 106202 113408

Neighbor

gene id symbol gene type direction distance location
LOC111196684 NA coding upstream 3508 95707 ~ 102694 (+)
LOC111196691 NA coding upstream 11502 89563 ~ 94700 (+)
LOC103027463 NA coding upstream 21391 76891 ~ 84811 (+)
LOC111196685 NA coding downstream 7592 121000 ~ 130341 (+)
LOC111196686 NA coding downstream 42638 156046 ~ 161475 (+)
LOC103028511 NA coding downstream 49200 162608 ~ 177778 (+)
LOC103028199 NA coding downstream 87232 200640 ~ 208869 (+)
LOC103027884 NA coding downstream 98496 211904 ~ 216369 (+)
G235490 NA non-coding upstream 16798 76417 ~ 89404 (+)
G235498 NA non-coding downstream 30192 143600 ~ 154653 (+)
G235508 NA non-coding downstream 30939 144347 ~ 145195 (+)
G235513 LOC108271652 non-coding downstream 47507 160915 ~ 167623 (+)
G235510 NA non-coding downstream 63530 176938 ~ 202618 (+)
LOC111196695 LOC108271652 non-coding downstream 81987 195395 ~ 198841 (+)
LOC103028116 NA other upstream 83633 20689 ~ 22569 (+)
LOC111196687 NA other downstream 79453 192861 ~ 194963 (+)

Expression


Co-expression Network