CI01000013_05847899_05849819


Basic Information

Item Value
gene id CI01000013_05847899_05849819
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 5847899 ~ 5850194 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_05847899_05849819.mRNA
GATTTGAAAAGGTCACAAAATGCTCAGAAAAAGGGAAATTTTCTCCATCTGAATATTGGCGATACCTCTCCATGTTAATGAAGCTAGATTTCATGAAATGCAGGTTTCCACTGTTTTTTGGAATATTTTTCTTCTTGTTGTCGGAGCACATCGTGGAAGGAAAGCATGTGGGATGTTTCAAAGATTCTGAACATGGCTTCAGCAAGGCACACAAAAAGCTACTTCAGGCTTTGCTTACACCCGCCAGACACCCGCATCCACGGCCTGCCCGTCATTCGGCGGACACCTGTGAGGCTTTCGTTCGGTCTTCATCACACATCAGTGAACGCTCACTGTCCCCCTGGCGGACAAGAATTGTGGAAAAGCCAGATATGTACCCCTCAACATATGAGGAAGCAGAGTGTTTGTGTGAAGGATGCATCATTAACGGGGTTGAAAATATGACCTACAACTCTGTACCTGTGGAGAGAACCCATTTATTCCTGAAGAAGGTCCCTTGCCCGTCTGACTCCAGCAAATACTCTTTAGAGTATGAACTTGTGTCAGTAACTGTGGCCTGTACCTGTGTGGTCCCTCGCCAGTACTAGAGGACAATATAGACCAAACTCGTAGAGACGTGTCTCATGTACCATGTCGTGTTTGTTTTAAAATGCAATTTTGATAAGGTACTTAAATCGTTTGATATGCTTATATGAATAAGCTAAAAGGTTGCATGTGTCACATGTTTTTTTAACTTATTATAAACCAACATAGTCTTTCTTGAAAGAAAGATACATTTGTATTATTGTAAAACACTACATTATTAGCCATTATTTATTTACATATTAATAACTTATTTACTATTTATTTAACTTTTATTTAAATTATGCAAATATGTGAACTTTTGATCTTGTGCTAAGCTGTCCTTTAATAACTCTGTCAATGACAGGAATAGTTATATCACGTTTGTTTCAGTGATAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_05847899_05849819.mRNA True 962 mRNA 0.39 3 5847899 5850194

Neighbor

gene id symbol gene type direction distance location
CI01000013_05808968_05845757 NA coding upstream 1381 5808968 ~ 5846518 (+)
CI01000013_05698947_05741884 ZFPM1 coding upstream 106015 5698947 ~ 5741884 (+)
CI01000013_05636898_05637901 NA coding upstream 209815 5636747 ~ 5638084 (+)
CI01000013_05607381_05608529 FOXL1 coding upstream 239329 5606883 ~ 5608570 (+)
CI01000013_05583328_05584677 B3GNT9 coding upstream 263195 5583328 ~ 5584704 (+)
CI01000013_05851074_05870330 TANGO6 coding downstream 880 5851074 ~ 5870870 (+)
CI01000013_05878375_05880680 HAS3 coding downstream 28181 5878375 ~ 5881372 (+)
CI01000013_05885911_05904644 TPH2, TBC1D15 coding downstream 35717 5885911 ~ 5905150 (+)
CI01000013_05927503_05928295 NA coding downstream 77037 5927231 ~ 5928559 (+)
CI01000013_05939966_05944534 ZNF143B, ZNF143 coding downstream 89772 5939966 ~ 5944658 (+)
G81630 NA non-coding upstream 55198 5792238 ~ 5792701 (+)
G81628 NA non-coding upstream 57204 5779007 ~ 5790695 (+)
G81616 NA non-coding upstream 78914 5768785 ~ 5768985 (+)
G81615 NA non-coding upstream 79393 5768299 ~ 5768506 (+)
G81608 NA non-coding upstream 86335 5761359 ~ 5761564 (+)
CI01000013_06050285_06059640 NA non-coding downstream 178415 6049864 ~ 6060269 (+)
G81679 NA non-coding downstream 179998 6030192 ~ 6032642 (+)
CI01000013_06076169_06080164 NA non-coding downstream 228368 6075400 ~ 6081684 (+)
G81672 NA non-coding downstream 233280 6083474 ~ 6084895 (+)
G80845 NA other upstream 1011667 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 1782070 4050837 ~ 4065829 (+)
G80062 NA other upstream 2263115 3584008 ~ 3584784 (+)
G79309 NA other upstream 3380728 2466765 ~ 2467171 (+)
G77695 NA other upstream 4894930 946521 ~ 952969 (+)
G81994 NA other downstream 1485751 7335945 ~ 7338239 (+)
G82168 NA other downstream 2178144 8028338 ~ 8041343 (+)
G82581 NA other downstream 3479135 9329329 ~ 9334948 (+)

Expression


Co-expression Network