CI01000013_06025196_06025887


Basic Information

Item Value
gene id CI01000013_06025196_06025887
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 6024703 ~ 6026840 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_06025196_06025887.mRNA
GTATATAAAGCACTCAGGTTTTTCTGTGTAACTCAGACCATTAGCAGTGTCACAGCTGAATACTCATCCTTAGCCAACCAAGATTGGGACACAACTTGGAAATAAGCTGACTTCAACATCACCACTTTTCAAGTGTGCAGTCAATTCTAGAGAGTGGCCGAAGTTATCAGGTATGTTTTCTTGGTTTGTTCTCTGACTTTTTGGTTTCAAAGGCAAAAACATTAGACTTTCTGGCAAGTCATTTTCATTGCACCAAGAGTGCACTTGACTCAGGCAAATATAAGACTTGCTACTGGGAATGACACGGTTGAGCAAAACTTAACCTCTGTGTAACTTTCAAAATAAATGAATGACCAACAAGGAGGAGGAAGATTACATCATTTGAACTTTTGTTCAAGAATCAGATGTTTTTCATGAGAAGATGATACACATGAGCTTGCATTTTATATGATTAATAACAATGCTACATGTTCTTCCACAGGTTCCATTCACAATGAAATCAATACTTCAGAAGGCTTTCCTGTGGTGTGTGCTGACTGCATTTCTGCCGAGCATCACTAGTGCAAAACCTCTGAATACGGATGGTTTGAGAAGGCTCAGTGTTTGGCTTCAGGGTAAGGTGAGGAAAGATGTCAGCAGCATGTCTGAGAGAAGTGAGAGTGACTCGACAGCTTTGCTGACTCAGAGGAACAGTGGTACTGAGTCATTTGTACCACAGCACAGGAGTGTGAGGGTAAAGCGGACAGAACCAGCCTACACGGTTAAAAGAATCGAAAGAGCAGGCTGTAATCTGGCCACCTGCTCAGTGCACGAACTGGCCCACCTACTGAATAAAATGCACACGAAGACGAGCAACGCCCCCAGTGAAAAGATCGGCTCAGGTGGCTACGGACGGCGACGGAGGCGTTCGTTCCCGTCAAACCACCCTGCACTAACTTTCCACGAAGGCCGTCTAAAGCTGGCATGGGTTCAAACCATCAACAAAGGGATTTAAGGAACACCTCTGCGGTTTGTCCTGAGCCTTTGGTTTATATTGGCTCTGTTTACTGAGATACTTCTGATACTTCCTTTGCTGAATGTTAGTGTACTCTCTTCAGGCACAAAGGAGCAAGTGGAGCTTCCTTCTCTCCATCCTCTGCCTGATGGGTTGGACAGAGAAGGATTCAGGTCGCTTAAAGTGGTTGTGGAAAAAAGGAGTGCTAACAGTTGAGAAAAAAAGAAAAAAAAAAAAAAAAAAAAAAGCTTTGTGAGGGTCTAAGGCAATGCGAAAGGAAATAGGTGGTCAATGCTCTGTGAATGTGTTTAGCATTCTTGTCATTCTAATGGAGCTTTGGGACTTGACTCTCTGTCTCTTCTGCAGCACTGATGCGCCCTCTGCTGAAGGAATGAAGGAACAACCCAGGACTCTGCCAGCCCAAACTTTTCAGAGAAGAGGACGGAGAGAGAATAGCAAGAAGAGGAAAAAGAACTTTTATGACTTAAAGCTATTTACCTTGGAGGACCAATGATGAAGAACAGAGAGAGAGAGAGAACTCTTTATGGAAGAAATGATTTTTGTTGTCCTCAAGGACATCCACATACTTGAAGACTGATTTATCTATACTGTGGGGACCGTGCAATAATTTACTTTAATATTATAATGTAGTCTATTATTAATGTGTATAAAGATGTATATTATGAAATACTGTATGTTAAAAGTTCATATATTTATATCTACATACTGCACATGTATTCTTAAGAAACTATTGTTATGTTGTGTTTATTTTGAAATAAGATGTTTATCCTGTGAGTTCATATCGCTATAATGCGAAGCATTTTTTTCCACATGAATCATTCAATAATGTGACACCTGTTAATTAATAACCTATTAAACTCCAGCAAGTGTGAGTGAGGACAAATTGTCTGTTTTATTTCTAGGTCAGTTTTCAGGTCGGTACCTTGAACGAA

Function

NR:

description
adrenomedullin 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_06025196_06025887.mRNA True 1947 mRNA 0.41 3 6024703 6026840

Neighbor

gene id symbol gene type direction distance location
CI01000013_05953069_05974101 SWAP70B, SWAP70 coding upstream 49852 5953069 ~ 5974851 (+)
CI01000013_05947579_05951579 WEE1 coding upstream 72094 5947579 ~ 5952609 (+)
CI01000013_05939966_05944534 ZNF143B, ZNF143 coding upstream 80045 5939966 ~ 5944658 (+)
CI01000013_05927503_05928295 NA coding upstream 96144 5927231 ~ 5928559 (+)
CI01000013_05885911_05904644 TPH2, TBC1D15 coding upstream 119553 5885911 ~ 5905150 (+)
CI01000013_06038814_06043689 NA coding downstream 11974 6038814 ~ 6045236 (+)
CI01000013_06050285_06059640 NA coding downstream 23024 6049864 ~ 6060269 (+)
CI01000013_06076169_06080164 NA coding downstream 48560 6075400 ~ 6081684 (+)
CI01000013_06132773_06163282 NA coding downstream 105725 6132565 ~ 6163637 (+)
CI01000013_06209318_06233289 NA coding downstream 182256 6209096 ~ 6233383 (+)
G81630 NA non-coding upstream 232002 5792238 ~ 5792701 (+)
G81628 NA non-coding upstream 234008 5779007 ~ 5790695 (+)
G81616 NA non-coding upstream 255718 5768785 ~ 5768985 (+)
G81615 NA non-coding upstream 256197 5768299 ~ 5768506 (+)
G81608 NA non-coding upstream 263139 5761359 ~ 5761564 (+)
G81679 NA non-coding downstream 3352 6030192 ~ 6032642 (+)
G81672 NA non-coding downstream 56634 6083474 ~ 6084895 (+)
G80845 NA other upstream 1188471 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 1958874 4050837 ~ 4065829 (+)
G80062 NA other upstream 2439919 3584008 ~ 3584784 (+)
G79309 NA other upstream 3557532 2466765 ~ 2467171 (+)
G77695 NA other upstream 5071734 946521 ~ 952969 (+)
G81994 NA other downstream 1309105 7335945 ~ 7338239 (+)
G82168 NA other downstream 2001498 8028338 ~ 8041343 (+)
G82581 NA other downstream 3302489 9329329 ~ 9334948 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_013332 admb coding NC_007129.7 CM002902.2 16798854 ~ 16801033 (-)