CI01000013_06076169_06080164


Basic Information

Item Value
gene id CI01000013_06076169_06080164
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 6075400 ~ 6081684 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_06076169_06080164.mRNA
GTACAAAACATGGTAAAACAAACCCTTACCATGTACAAAACAAATATCAGATACTATCAGCACAGTTGAACAATCAGAATCGCGTATTTCAGAGACCCCTGTAATAATGCAGTGCATTAATTGGTGGTGGTTGTAAATAACCTTTAACTTTGCTATGTAATTTTGTCTAGCACTGATTGTGGTTCAAACATGATTGATAACTCAAACTGTGTGGTTTATTTTATCGAGAGGTGTGTTATTATTTTTCTAAGTGATCAGGCTCAAGATTTAGCTTGGTGGGCAATAAAATGGGGTATTTCCAAAAGACTTCTGTAGGGTGAGCCATATGTAACAATCAGAATATTATAGACACTGTTGAGGAACCACCCAGACACCCAGGCATCTTGGTAGGGGAATTTGCCTGCTAAATACCACTCACATTTTCTTCAAAAAATTTAAAAATCTAGTCAGTCTTCAGTCTTGGCATCATTACCAATATGCGATTAACCCTACCCAACTCATTTCAGGATGTTGAGAGGCACTATGCACAATTAGTCAAGGATGAGGTGAGCTGTGTTTCAATCCTTATGGTAGCATAGAGTTTCTGCTCCCTCTGAGGTAGTATAACATTTCCTCATGAATATTTGAACAAGGCTGCATGTTGGTGAGTCTCCTTAGTTCCCATTGCATTCACTTCTACAGGAACTCTGGGTCAGCAGGAGCAAAAAAACATTTTTAAACAGCTCAAAATTTCAAAGTTTGAAACTGGTTTCAGTGTTCAGTCAGAACGATGACCCTAAGGGCCACCTCTCATGGAGAGCTCCAGGCTCTGACTTCAATGAAGACCTCTGCTTCAGACAGCGGTATTTTTAAGTCCCTTTCTCACAGCAGCAACAACATGGGGGGACGATTCGAAAGCATTGAGGAGATTAAAGGAGTTTCGAAACCCACACACCCTCCTCGAAGACCTGTACGTGCAGTCCGACCTGTCAGTGCTCTGAGTGGCAGCGGCTCCTTCCTGCAGATCAACCACCTGCAGGGAGAACTAGTGAGGAAGAGGAAGGAATGTGAGGACCTGAAAAAGGAGAACAAGTATTTGTCTAACGAAATTCACATGGAAAGGATAATGATGAGAACTGAGAGTGAGCTCACCATGAGAAACCTGCGGAATCTCAACCAGGAACTCCAGGCCCAAGTTAAAGAGCTGAAACAGAAGCTCTATCTCAGCCAGCAGAGGGCGACACTGTGTTCCAGGGCAGCCGAGGATGCTGATAGAGCACGAGCAGAGGCGGACAAGGGCAGGGCACTGGCAGAGGCCCGAGCACTAGACAGCAGGCAAGAAAAAGATCTTGCATTAGCTGACAAAAGACGGTTCAGCGATGAACTACAGCTGCTGAAGAAAGAGCACAATGATGTCCAGCTACTTTTAGCACAGGCTGAAAAGAATTACTTTGAGACTAAGCTTAAACTAGACAGGGCGTCAGGAGAAAAGCATGCTCTCCTGGAGGAGAACAGAATACTGGAAGATGAGAGGAACACGTTACGACACAAACTGAAAGAACTGACTGAGGAGAATGTGAAGATAATGGAAAAGGAGGTGAACTCCAGACGCAGAGCTTTGGTTGCTGAAGAGCAGAGTGAGAGGGCCAATAAAGCCCAGCAGGAGGCTGAGCAGGAAAGACATTTAGCTGAGCAGGAGAGGCAGGATCGCACCAGGGAGTGTCTCAGCTGGAGAGAGAAACACCAGGCCCTGGCAGAAGTCATCAGAGCGCAGGAAGAGCTCAAGTCTCTGAGGCAGACCAAAGCAGAAGGAGACCCTGTGTACATCTCCACACCTGACCTCAACAGTGAGGATTCAGAGAGGAGCAGAACAATGTTTAGGGTAGCCGCTCCTCGAGTTGGAAGAGACACTGGCCCAGCCCAATTCAGTGAGCTGTCACCAATGGCAGACTCTCACGATTCTGGATTTTCAAGGAGAAACAGGAAAGTGGAATATTTCTGGATCCCCACTGATGAGGAATAATTGCACTTACAACAAACACTTGAGCTGATCAAGTTCTTCTTTTATTGTAAATTCAGCAATAGTGGTGAATACAGCACTAAACAGCCTTACAATGACATGATCATAAGCCATTTCATTTGACAATTGGACTGCAGTTAACATGTTGGCAAATGTAAGTTTAACAAGACCGACTGTCAAATACAATTAAACACCTGTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_06076169_06080164.mRNA False 2199 mRNA 0.45 7 6075400 6080361

Neighbor

gene id symbol gene type direction distance location
CI01000013_06050285_06059640 NA coding upstream 15131 6049864 ~ 6060269 (+)
CI01000013_06038814_06043689 NA coding upstream 30164 6038814 ~ 6045236 (+)
CI01000013_06025196_06025887 NA coding upstream 48560 6024703 ~ 6026840 (+)
CI01000013_05953069_05974101 SWAP70B, SWAP70 coding upstream 100549 5953069 ~ 5974851 (+)
CI01000013_05947579_05951579 WEE1 coding upstream 122791 5947579 ~ 5952609 (+)
CI01000013_06132773_06163282 NA coding downstream 52204 6132565 ~ 6163637 (+)
CI01000013_06209318_06233289 NA coding downstream 128735 6209096 ~ 6233383 (+)
CI01000013_06278898_06283356 MGAT4C coding downstream 198537 6278898 ~ 6285154 (+)
CI01000013_06311729_06313001 RASSF9 coding downstream 231368 6311729 ~ 6314124 (+)
CI01000013_06405275_06423872 SLC6A15 coding downstream 323835 6404196 ~ 6424521 (+)
G81679 NA non-coding upstream 42758 6030192 ~ 6032642 (+)
G81630 NA non-coding upstream 282699 5792238 ~ 5792701 (+)
G81628 NA non-coding upstream 284705 5779007 ~ 5790695 (+)
G81672 NA non-coding downstream 3113 6083474 ~ 6084895 (+)
G81738 NA non-coding downstream 250679 6331040 ~ 6331644 (+)
G81754 NA non-coding downstream 271544 6351905 ~ 6352119 (+)
G81762 NA non-coding downstream 301461 6381822 ~ 6426042 (+)
G81780 NA non-coding downstream 307478 6387839 ~ 6388687 (+)
G80845 NA other upstream 1239168 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 2009571 4050837 ~ 4065829 (+)
G80062 NA other upstream 2490616 3584008 ~ 3584784 (+)
G79309 NA other upstream 3608229 2466765 ~ 2467171 (+)
G81994 NA other downstream 1255584 7335945 ~ 7338239 (+)
G82168 NA other downstream 1947977 8028338 ~ 8041343 (+)
G82581 NA other downstream 3248968 9329329 ~ 9334948 (+)
G84005 NA other downstream 3521250 9601611 ~ 9602235 (+)
G84194 NA other downstream 3950247 10030608 ~ 10036953 (+)

Expression


Co-expression Network