CI01000013_09178561_09180465


Basic Information

Item Value
gene id CI01000013_09178561_09180465
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 9177107 ~ 9195268 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_09178561_09180465.mRNA
ATATAAAAATAAAACACATGTTTGGTGTGAGCGCACAGCAATGCATCAGGTACTTAAGATGTAACTCTACGTTCCACAGAAAAGCCTGAAGTATCTTCAAGCTACTATCCAGTGTCAATGCTTGAAATGGTGCTATAATTCCTCAGGCTGATACACTGCCAATTTATCCATGCTTCTTACATGGCAACGGGAGAGTATGGATAAATGGTTTTAAAGTAGTAAACACCGGTCACACATCAACCTCCAAATATAATCACAGGTTTCATTTCACTGCAACATTTCTGTAAATATCACATAGTTTATATTTGATTAGCAAATGAATGCAACACACGGATGACTTCGAAGTGGTTAAATTATTAAATTCTGATCCTTATTTTTGCACTTATTGCAACTCAAATCTCCTTGTTTTTATTAACATATCCACAGTCCTGTACTATAGCCAAATGTTCAGCTGCATGCTTGGTCTCATATTCATCTCCCTGCCCCATCCAACCCCCCAAGCCCTCCACCCCCCGCCTTGCCCCGGTCCCACTCCTCCTCCATCAGCTCATGATTTCATTTAATTCATCGTAGCCCTCCCAGACTCTCCCCAGGCCAGTCAGCGCAGTTGACAGCACTGAACTTGTATAGGCATAAAGCACAGTGATGATAAGCACATTAAAGCTGCTGTATTGGCTAGGGGAGGGTCTAGCTCCAGTAGCTGCTGCCTTATTGGTGGTCTGAGTGGCAGGGGAGGGGCTGGGAGGAGTACAGGCAGAGAGAGAGAGAGTGAGGTGAGAGCTTTGCGCTAGGTTGGGAGGGAATGCCCACTAGATGCGGCTGCTGATAATAGCGTGTATCAGCACCAGAGCAGTGATTGAGAGCACAGACAGAGAGAGGAGGAGAGAGGAGCAAGGAACAGCATGCCGTGCCATAGAGTGGTTAAATCAGAGCAGCGTGATTGATTCAGGCAAACAAGGATAAAAAAAAAAGTAAAAGGAGATCTAGAGAGTCTCTCGGAGCGCAAAATCCTGAGAGGAGAACGGGGGTGGAAGTTAGAAGGCTGTGGGAACTCATCAACTCCTTGTGGAAAGGCACAGCTGAGGTCAGCAGGCAGGAGTGTGGGATCGAGCAGCAGCTGAACGAAGCCAGGCTGGGGGTGGACACTCTTTTAGAGGGGTAAAGAGCGGCGTAGGGTGAAGGAATACTGCTGAAACTTCAGTTACACTCAACGTGCACCTGCCCGTGGGAGTAACGCTTCTGGATATTACAGCAAGGCTACAGGGCAAGCTGCCACATCCACTAGAGCGATTTTGCAAAGCCACTGTCTGGTTGACTTAATCCTGATCTTTTGTGTGAAAAAGAAAGACTAGCATTTTTGTAGCACTAGAGCGCAAGTTCAAGGTTCTGCTCAAGGGCTATTCTGAGAGACATGATAGAGAATGAAATAAAGAGCGCGGCTTCCGTTCCAGAGCATGGAGAAGTCAAGTAGTGAGGAATCTGCTATCCACCGTAGCCCCTCTGTGGACAGCCGCGACTCAGACTTTGCCCAAGCCTCCACCTCCGGACGGCCGTTCGGAGGACGAGGCTTTACCGCTGGAGCCTTTTACGGGTCCACTGGCCCACGTGCGCAAACTGCTGCTCAGAGTGGGGTGGCCGGCGACGACAAAGGCAGTAATAAGTACAAGGCTCCTAAAGGCAGCAAATACGTGGTCTTTTATCTGGATCTATCCTTTGTGTTCCTTCTAGAGTTCAAGAAGTGCAACATGGCGAGAGGCTGTCTGTGCTGTCTGAAATACATGATGTTTGTCTTCAACCTCATCTTCTGGGTCATTCCAACATGGACGGCAGTCAAAGTCCTAGAACTATGCGTGTGCAGTTACCAGCGTGTGTGTGATTTAGGGTTACGACATTCCTCAGAGAGTGATGGCGATCGAAGCTTGGTGATCCTAGGAGAGTGTGACTCTGTATCATGACACCCCTGGGACCACGCTCCTCTTGCTTTGGCGCTCCAGGAATTGCAAGGTTACCATTCTGTGGAACGCCGATGCCTGTCACCCCATCCGCTTTAGAGAGCCAGGTGCTGCCGCCTGCTGCTTCTTCACAGAGCTTACGGTTGTAACTTGAGGCACTAGGTAAATACAAGCGTGAACCTCAGGCATGTCATCAGGCTCCTGTACAGAACTTCAGCAGTTGCTTGTGACCATCTGGCTTGTCTTTCTTACGTGGATTAGCTTGGTTTGAGCTGGGCAGCTTCAGCACAGATTAGAGCATTTAGTGGTGAGCTTGGTCACACCATGCTGTGTTCCTGATTCTGTAACGGGTCAGCACTCACCATGTCTAAATGACCCACCACGTTTTATTTATTATTATTATTATTATTTATGGGGATTGCTTGTAATTTGCCCCACTGGCACCAAGCGGAATGTGACACATACTACTTGACAAGTTACTATTTGTCTCTTCAGTTCGTATTTACATTTAGAAAAGAGTGTTTTAAACTGTTGCATGCTGTTTTGCAAAGTAATACTATTGTATTGTTATTGTACTAAAGCTAAAACAATATATTCTCAGGAAAATATTTATTTAGTATAAATATATGTATCTTTATACATATTTTTAATCTTTAAGGTATCTTAAAATTGCAATTTGTAAAGCACTTTTCACA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_09178561_09180465.mRNA False 2647 mRNA 0.46 2 9177107 9181157

Neighbor

gene id symbol gene type direction distance location
CI01000013_09075883_09113011 NA coding upstream 63824 9075825 ~ 9113283 (+)
CI01000013_08943859_08944315 NA coding upstream 232482 8942838 ~ 8944625 (+)
CI01000013_08925040_08937556 CRACR2A coding upstream 238184 8924561 ~ 8938923 (+)
CI01000013_08652173_08660558 NA coding upstream 516036 8652173 ~ 8661156 (+)
CI01000013_08530191_08551478 NUP205 coding upstream 625486 8529349 ~ 8551621 (+)
CI01000013_09243644_09260619 TSPAN9A, TSPAN9B, TSPAN9, TSN9 coding downstream 62487 9243644 ~ 9260619 (+)
CI01000013_09279917_09290301 TSPAN33B coding downstream 98760 9279917 ~ 9290760 (+)
CI01000013_09430170_09443518 RBM28 coding downstream 249013 9430170 ~ 9444023 (+)
CI01000013_09681047_09683275 LRRC4, LRRC4.2 coding downstream 499890 9681047 ~ 9683433 (+)
CI01000013_10261599_10283287 NA coding downstream 1079114 10260271 ~ 10283967 (+)
G82620 NA non-coding upstream 38662 9136983 ~ 9138445 (+)
G82612 NA non-coding upstream 102531 9065133 ~ 9074576 (+)
G82557 NA non-coding upstream 194606 8982223 ~ 8982501 (+)
G82526 NA non-coding upstream 266481 8910397 ~ 8910626 (+)
G82503 NA non-coding upstream 331047 8834072 ~ 8846060 (+)
G82638 NA non-coding downstream 55831 9236988 ~ 9237208 (+)
G82639 NA non-coding downstream 58224 9239381 ~ 9239585 (+)
G82580 NA non-coding downstream 185690 9366847 ~ 9388557 (+)
G82659 NA non-coding downstream 189351 9370508 ~ 9372174 (+)
G82666 NA non-coding downstream 199898 9381055 ~ 9384143 (+)
G82168 NA other upstream 1135764 8028338 ~ 8041343 (+)
G81994 NA other upstream 1838868 7335945 ~ 7338239 (+)
CI01000013_06076169_06080164 NA other upstream 3094740 6075400 ~ 6081684 (+)
CI01000013_06050285_06059640 NA other upstream 3117611 6049864 ~ 6060269 (+)
G80845 NA other upstream 4340875 4835078 ~ 4836232 (+)
G82581 NA other downstream 148172 9329329 ~ 9334948 (+)
G84005 NA other downstream 420454 9601611 ~ 9602235 (+)
G84194 NA other downstream 849451 10030608 ~ 10036953 (+)
G84215 NA other downstream 895297 10076454 ~ 10079336 (+)
G84250 NA other downstream 1033970 10215127 ~ 10215962 (+)
CI01000013_08519555_08527531 FAM107B coding upstream 513900 8519110 ~ 8527711 (+)
G82453 NA non-coding upstream 340772 8700616 ~ 8700839 (+)

Expression


Co-expression Network