CI01000013_10335904_10336688


Basic Information

Item Value
gene id CI01000013_10335904_10336688
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 10335904 ~ 10336896 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000013_10335904_10336688.mRNA
ATGAAGCAGAACATCTCTGTTAATAGATGCTCTTGTATAGTTAAAGAGCTCCAGCGATTACCACTACAGGAGGGCATTCTGGAGAGAAAAGCTCACTTTCTGCTTGTCTTGGCCGTGGCAGGAGATGTGAAGTCATGGGATATGAGATATAACTGTGCCTAGAGTGTGTATGTGCGTATACAAGTGCGATTATGAGGCTGTGACAGATATATGGGGTCAGATTGTTTCATCTATATTACATAACAAATATTGAACTTGTGTTTAACCCTTAAATGGTTTTTGTATCCTGAGGGATGCAGACATTTGAGAGCATGGGGGAGGGACAGTGAGTGAGTGGGACCAATTTCTGAAAAAAAATAATACACTATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000013_10335904_10336688.mRNA True 370 mRNA 0.41 2 10335904 10336896

Neighbor

gene id symbol gene type direction distance location
CI01000013_10261599_10283287 NA coding upstream 51937 10260271 ~ 10283967 (+)
CI01000013_09681047_09683275 LRRC4, LRRC4.2 coding upstream 652471 9681047 ~ 9683433 (+)
CI01000013_09430170_09443518 RBM28 coding upstream 891881 9430170 ~ 9444023 (+)
CI01000013_09279917_09290301 TSPAN33B coding upstream 1045144 9279917 ~ 9290760 (+)
CI01000013_09243644_09260619 TSPAN9A, TSPAN9B, TSPAN9, TSN9 coding upstream 1075285 9243644 ~ 9260619 (+)
CI01000013_10502138_10525511 GRM3 coding downstream 163794 10500690 ~ 10525674 (+)
CI01000013_10586449_10594082 NA coding downstream 248922 10585818 ~ 10594442 (+)
CI01000013_10756927_10790192 FRMD4A coding downstream 420031 10756927 ~ 10792761 (+)
CI01000013_10808688_10819703 NA coding downstream 471792 10808688 ~ 10819925 (+)
CI01000013_10821530_10827412 SEPHS1, SEPHS1.L coding downstream 484634 10821530 ~ 10827977 (+)
G84299 NA non-coding upstream 48594 10286011 ~ 10287310 (+)
G84289 NA non-coding upstream 81645 10253174 ~ 10254259 (+)
G84265 NA non-coding upstream 148247 10186533 ~ 10187657 (+)
G84202 NA non-coding upstream 208152 10123760 ~ 10127752 (+)
G84242 NA non-coding upstream 218050 10117614 ~ 10117854 (+)
G84304 NA non-coding downstream 602 10337498 ~ 10339002 (+)
G84323 NA non-coding downstream 11964 10348860 ~ 10350255 (+)
G84324 NA non-coding downstream 17787 10354683 ~ 10356731 (+)
G84325 NA non-coding downstream 20862 10357758 ~ 10380783 (+)
G84364 NA non-coding downstream 125924 10462820 ~ 10463073 (+)
G84250 NA other upstream 119942 10215127 ~ 10215962 (+)
G84215 NA other upstream 256568 10076454 ~ 10079336 (+)
G84194 NA other upstream 299111 10030608 ~ 10036953 (+)
G84005 NA other upstream 733669 9601611 ~ 9602235 (+)
G82581 NA other upstream 1000956 9329329 ~ 9334948 (+)
G84768 NA other downstream 1833093 12169989 ~ 12170818 (+)
G84790 NA other downstream 1848046 12184942 ~ 12201975 (+)
G84864 NA other downstream 2028153 12365049 ~ 12375905 (+)

Expression


Co-expression Network