G81672


Basic Information

Item Value
gene id G81672
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 6083474 ~ 6084895 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU92942
CAAGTGGTGGAGTCTGTGTCCGTGGAGGCTGAGCACTGGGAGGAATCATGGTGGGAATCTGGGGCTGAAGTTTTGGCACTTGGTTTTTATTCAAAAGGAAGGACTGAGCAGGTCTAAGGCTGATCTGTAAGAATGGATCATGAAAAAAACAAAACAAACATTGTTAGGTTAATAACAAAGATTAAAATGTTTAAGACCATTGTGCCAATTCACACCCTCATATCTCATAATCGCAGTCAGTGGACTGGATAGGAGTTTAAGAATGAGGGATAGGAGAGAGGCATAAGGAGGAGATAAAGAAAAGGAAGAAACAGATCAGACAAAGAAAGAAAGAAAACTACCATCCAGTTGAGTCCCTCAGAATAACGCGTCTTTTTATAATCACAGGGTGCAAGAGGTTTTGGGTTTACTCAGTGTTTAGTGTCTCTGGTTTACCTCATCTGCATTGAGCTGCCCTTTCTTGAAGCGCGGAGGCATGTCTTTAGATTGAGCTTGTTGCTGGTTCGAATGGTTCTGGTTTTGATTGTGAAAATGCTGATTCTGTCCCTAACGATATACAATTATTTAGCAATCTCAAACTGCTTTGAAAAAGGTAAATTATTGCTGTTAGTGCTGAAAAAAAAAAAAAAAAAAAAAAAAGTTTATGCTTACCTGGTTAGACTTGATGAAAGGCTTCATACCCAAGTCAAACTGTGACTGTGGTTGGGAAGTCATGTGTCCACTGTGGCCATTGAAAAGAGGATTTGTACGATGACGTCCTAGGGTGGGGGAAAATCTGTCCTGGATCACACCTGGACCAGTCCCTATGCCAATACCTGCATATACAAATGCAGATAAAATGAAGACATGGCACATTATTCAAGAGACAATTCATAAATACAATTCACAGGTTCTAAGCTCACCTGGAATCTGACCAAACATATCGGCCAATCCCCCAAGAGTTTCTCTATCCAGTTTCATCCTGTTCGGCATGAAGGGGCCTTCTAGGAAGAAGTCCATTCTCATTCCCTGGTTCATGGGTGGAATGAAAACACCCAAATCCTTCAACTTCACTGCATCTTGACGAATCTGGTTAATCGTCTTTGGTCCGTTGTCGATAAAAGCTTTGCGAGGAACCCAATTGTTCTCTCTCAGCTCCACGGTGTCCTGCAGTAGGAAACGAATCCTTGCAGGCAAATCCTTGTTGTTCATTAAGGATCGCATTCGGCCAAAGTACTGATCCATTAAAGACTGTGGGAAAAGCAACAATAAATGAGGATGCATTCCCGCAAATGACAATCATGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92942 True 1286 lncRNA 0.42 2 6083474 6084895

Neighbor

gene id symbol gene type direction distance location
CI01000013_06076169_06080164 NA coding upstream 3113 6075400 ~ 6081684 (+)
CI01000013_06050285_06059640 NA coding upstream 23205 6049864 ~ 6060269 (+)
CI01000013_06038814_06043689 NA coding upstream 38238 6038814 ~ 6045236 (+)
CI01000013_06025196_06025887 NA coding upstream 56634 6024703 ~ 6026840 (+)
CI01000013_05953069_05974101 SWAP70B, SWAP70 coding upstream 108623 5953069 ~ 5974851 (+)
CI01000013_06132773_06163282 NA coding downstream 47670 6132565 ~ 6163637 (+)
CI01000013_06209318_06233289 NA coding downstream 124201 6209096 ~ 6233383 (+)
CI01000013_06278898_06283356 MGAT4C coding downstream 194003 6278898 ~ 6285154 (+)
CI01000013_06311729_06313001 RASSF9 coding downstream 226834 6311729 ~ 6314124 (+)
CI01000013_06405275_06423872 SLC6A15 coding downstream 319301 6404196 ~ 6424521 (+)
G81679 NA non-coding upstream 50832 6030192 ~ 6032642 (+)
G81630 NA non-coding upstream 290773 5792238 ~ 5792701 (+)
G81738 NA non-coding downstream 246145 6331040 ~ 6331644 (+)
G81754 NA non-coding downstream 267010 6351905 ~ 6352119 (+)
G81762 NA non-coding downstream 296927 6381822 ~ 6426042 (+)
G81780 NA non-coding downstream 302944 6387839 ~ 6388687 (+)
G81765 NA non-coding downstream 363668 6448563 ~ 6449178 (+)
G80845 NA other upstream 1247242 4835078 ~ 4836232 (+)
CI01000013_04051081_04064651 NA other upstream 2017645 4050837 ~ 4065829 (+)
G80062 NA other upstream 2498690 3584008 ~ 3584784 (+)
G81994 NA other downstream 1251050 7335945 ~ 7338239 (+)
G82168 NA other downstream 1943443 8028338 ~ 8041343 (+)
G82581 NA other downstream 3244434 9329329 ~ 9334948 (+)
G84005 NA other downstream 3516716 9601611 ~ 9602235 (+)
G84194 NA other downstream 3945713 10030608 ~ 10036953 (+)

Expression


Co-expression Network