G82581


Basic Information

Item Value
gene id G82581
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 9329329 ~ 9334948 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU93966
GTCCAGAGGTGATTCTTTCTTCTTCCCTGAGTCTACAGTTGTAGAGCTTGAGGGTGTGCTTGGGCATGACTTGTCATCTTTCTTCTTTTTGTCCTTCTTGTAGCCAGAGAATACAGCCTTCCACAGGGACTTGTGCTTGGGTGGTGTTTCCTCTGTGCCAGATAGTCTCTCATTTTTGGCTTTCTTTTCCTTTTTGTTCTTGCGTGGAGAAAACAGTGAGCTGCGTTTCTTGCTCTTGCCTCCTGTGGAGCTCTCTGAAGATGTGACAGAACTGTCCATGGTCTTATTGGCTGGTGTAGTTAAGAAACGGTCAGGGAGTGTGTCTGTCTGCTTTTTGGACTCCAAGGCCTTCACCGCAGAGTCCTTGGGAGAGTTTATTTGCTTTTTGTTTTTTCCTGTTGTCTCTGGAACATTCCAGGCTACTTTTGCCACAGCACCCTTGGCAGCCTCTGATTCTTTCATCTTACTAAGCTGCTTGGCCATGGCATCTTTCAGAGCTTGGCTTTTCACAGACTTTTCCCGTGCCCTCATTCGCTCTTCTGCGATTTCCTTGGCTTCAGGAGAAAATTGTTGGGGACTCTTTCCTGTCCGAGAAACCCCTCCAGTAATGTTGGGCTTGCCGTTTTCCATTGCCAGTGCCAGGTGGAAAGGAGGCTTGTCCCGGTTGACCTTGCTGGTTGGAGGGGTGTAAAATTTTTCCAGACCACTTGTGTCTGGAGTGCGATCATCGTACGTGTCTTCAACGTCGTCGGCAAATGGTATCTCGTCTACGCACTCCACAAAAGATTTCCTCACTTCTTCGTGCCGTGGTTTATTCTGTTCCTTTACCCTCATCACAACAGGTGGGTTAGTTCTAGGGGTCGGCACTGGAGCCATAACTGGTTTTGGTTGAGGGGGACTAACTGGAGTCTTAGGTTTAGGAGGCGTAGTCTCAGATTTGGGTTCCTCTGTGTCTTCAAGGAGGTTGTCCCAGGAAGCCTGAGGCCTTTTGTTTTGGAGAGCAGCTGGCTCTTCATTAGGTGGAGGTGGTGGGGGACTGGAAGGAGGTGTGAGCATGGTAGAATCAGAGTTGTTGTAGCTGTCACTAGTTGCTGTCTGACTGGTGGTCACGCTTCCATTAAGACCCAACCCTGAACTGCTGCTCAAGTCCTTCTTCTCAGAACCATTACTCTTTGGTTCCACCGGATATATAACCTGACCTTCTAAAGTAATGTTGATCCTGCGTATGATAGAACGGCCCGCGAAAGTAGGCTTCTGCTCTTCAGACAAGTCCTCTGGGGTATAAGACCTGGGAGATGATGATTCAGGCGTTGGAGTTTTCACAATGCTCTTATCCACTGTTGTTCTGCTTCGATCCAGAGGCGTGAGTCCTAAACTTTTTCTGATCTCTGCGCTCTTCAACCAGAACTCCTCAATGAGGTCTGTTTTCTTGACAGTGGTTTCCTCGGGTGCTGGATCATTCAAGGATTCATCGGTTCGGTTCTCAGAAGCAGGTTTAGCCAAAGGAGTGGAAGTGACTGCTGGGACTGGCTGAGTTCTTACAGGGGAGCTTGAGGAGAGGGGTGAGGGTGGCTCATGGCAGGGTTGTGATTGGGTACATATTGGAGATAAAGGATTACCTGTTGGAGAACAAGCACAAGGCTGGGGCTGGACAGGTGATTTGGGAGACACCGTCTCTGGCTGTGGAACAGGTTGGGAGCAGATGGGCGATAGTGCAACAATTTGAGCAACAGGAGAATGAGGTCTTTTAGCATCAGGACTCTGAGGTGGGGGAATGTCCAGTTTGGCATTATCAGGTAGAAAGGGATCAGGGAAGAAACGTGCACCAGGAGATTTGACTAGTATTACAGGAGAAACTTCTTTCACCTGTCTCCTCAATGGGTAAAGCAGGTTTTTGGATTGGAGACAGCACAACGTCCACAATCAATTCCCTTGGATTTGCAGATGTTTTCTCTGCAAGGAAAAATAAAATTGGCTCAAATATTGATGGACATTGAAAATCCCCTTGTGTTGAGATTTTAATCATCAAAGTCTGAATAATTATGAACCAAGACATTGATGCAATGTATTCAGAGACGTAAGTTATGCAAGGACATGAACATTTGCAATCATTGGTCTCAAACAAAAATGGAAAAGGCATGAAATTACATGATTATGATTAGGTTATAATTACCAGTGTTGAAAACATGTCCCTGGCTCTCTGGTTTGCCATTATCCAGGGGAAGCATCACCACTTCATCTATGCAATGTGAACGGGCTTCAGCCTCTGCATCTGAGGGAATGTCCTCTGTAACATTAGAAATTAAAAGTGTGAAAGTCTGTTCAAAATATATGGAAAGCAAGCAAATTCTGTATAAATGTCTATTGACAATGTATTATTTCAAACACTTTAAGTTGTCAACCCTGTTACCATCATATTTTCCCCCTTTTTAAATAATTTAAAATAAAATATAAAAAAGGTAAGCGACAAAGTAAAGTCAAAGTAACTTCATCTCATGTTTGTCAGTAGGAGACAACCTTAAAATGTCAAGCTAATTAAGCTAAATTTATTTACTAAAATAGTGAAAGGTGTTTTCAGTTAATTAAATTCTAAGTAGTACTTTGCAATTTCACTACCTCGAGGCACAAGGCCTGGTATTGCCAATTAAGCTCTAAAACTGGTAACATTTTAACCTTTCTAAAGGCGTAAAGAAATCATAACATACGATGGCACATGGATTTGACAAACCTTGATCTATTTCAGTGCCCGGCTCAAAGTCAGGACTGCCCGCTTCTGCGTCATCATCCTCTTCACAGGGCTCTGGGATCACAGGAGAACAATAAGATGATGAATAAGTTGGGCAAAAGTCTAAAAGATTAGTGAAAGACTAAAAAATAGTATAAACTATTAAACTATACTTATGAATATTAGAAGACCTTCCATATACAGAAGGTGTTAGCAGTACAAAACAGTTTTCTGGCTAAATTATGAAATATGTGTGCAAAGAAAGAAAATATCAATCATGTAGCTAGCTAACAAATGATGGTCTTTAGGGAACTTTAACTTAAACATACAATAAGTGCACATGACAAAATGTAGAAATAAACAAATGGTATTAGTAGTTAAACACATGCAAGTATGCAAGTTTTCACACAGTCAAATGGATTGGGCTCAAAACCCACAGCTGTTGAGAAGGGTTGGGATCTGGGTGAGTAAAGAGGTGTGAATAAAAAGCAATGACACCAAACTGAACATTACAAACATAAACAAATATGAAGACTTAGCTGAGACACCCTCTACCACAAACCACCATTTTTGTCAGCAAATTATAATCGTTAATGTTAATATTTAGACAAAAGTTCTGCTCATTACAAGCAAAACTTTGCACCATAGTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGCTCCAGAATCGTATGCAACCCTTTTCAGTCTATTTCTGTTCTGCATGACTGTTATATGCACAAGGTTGTCATATTTGAGTTTTTTGCGTGTCCGCTCTCTGAACCATGAAAATACCTAGAAATGTTTTTAATTCTTTTTGGCTTTGACCTCTCCGTGGCATTGTGCTGTGGAGACAAAGTGCTTTACAATTATGTTACAACAAGCTCCTTGTGTCCTCCACAGATGCACCACATACATCCTGGGACAATAAATTTAGAGTGTATGAATTCTTTTAACAATCTGTACTTACATAATTTCAGAAGAATGCTTAAGGAAACATGTCAGATGCATGCATTAGTCAGTACATCTTTGCTTTGCGTCAAGCTGAATGATAAAATCACACCAGTCTCACGACTCCAGCATGCAGTAGTGTCGACTTGTAATTGCATGTTACCTTTTAACATGCAATCAGTGTTCAACAATGATTGCAATGGTGTTAAGTGTTTAATAGTCCTGCCATGCACTGATGTGTGTTTGTGTTAGCACTAATATAAGTTTCTGGACTTGTTTTTCTTTTCTACCTTTAGACATCGAGTCCAACCAGGCTCTGACAGCCTCATGACGCATGGATTTGTGGGAGGGGGCTACAATTAAACCAATGGGAATGGGAACAGGTACATGAAATGCATAGTCACACAACAACATACAAAAATAAATTCATTCATGAATAAATCAAAGAGATTAACAGAAAAAAGGGACATGTACTTAGTTAGCAATGCCCTAATATCCACAATGATGATAAAATGAGACACAAGGACATAAAAAAATATAGGAGAACAAATAAGTCAACCCGAGAAAGGTCAACGTAATGTCAACAATAACAGTGAGTGATATACAAAAAGTATCAAAGCAAGATAATAGAATGCAGAAAGTATAAGAAGCAAGCAAAACACTGTTGTGGATGAAAGGAAGAGGACAGAAGTTGTCCAACTGACCAGAGAAATTCACATTCACAAAAGCGATCACACATGCAAATCACACACACACATCCCACAACACCTGGTAATATTCATCTAGAGTTCACCACTATTAAAATTCTGTCTGATGTCCAATTTTAAAATAATACTAATAATAATAAATGCTACAAGTGAATTTGGGCATCACAGCATTATAATGTGCAATAAGAAAATGGATATTCATTCTGAGATTATCTAAAGATTACATTTAATCAGTAAAGATTAAAGATGAACTTTAAGTAAGTTAGATGATGGCACAGGGAATTGAACATGCACCAAAAAAAAAAAAAAAAATTTACAAAATCCAATTGCAAGGAAAAACATTTGAGATGCATGTTAATACCAGGTGTAAATAGGACCATCTACCACCCCCAAAAAGCCACAGGGCCCAGGTATGACTCCTCCACATGGGGTTACCTGTGGAAGAGGTGGGCTGTGTGAGCTGGGTGTTCAGCGAGGGCTGGGAGCCTAAGGGTGAGAGCGAGGGGCCCTCCACCACCCCTTCAGCCTGTTTGGATGTCCAGTGTTTGTCCATCTGGATGTCCAGAGGGTCTACTGGATGAATAGCTTGCTGGATGTGCAGGTTTCTAGCTGCATGGTGGCATTACGGGTAGCCATTTAGGTGACAAGATCATTTTGTAGGATTAATTGGTGAGTCCATTAGCCCGTCAGGAACAGAAAATCCAATTTGTTTGAAAAGTAAAAAGGTCCAGGTCACAAAAAGTCCCCATAGGCAGCAATGTGAGCAGAGAGTGAGATTCAGCAGCAATTAATGTCCAGAAAGAAACAGTAAAGACAAAAAAAGAGAGGAGAACATTATAGTTTAGAATAGACTGTAAAGTGCAAAGTTAGTACATACTTTAGAAATGTAGCATGCAAAGTCTCCTCCACAAATGACAGCAATTTTTTAAAAAAAAGCACCAACTGCATGGGTGCTTTCACACTTGAGCTTTCGATGTGAATTTGAGTACACTTGATGTTAATGTTCAGTTCATTTATTTAGCATGAAGTCGTGTCCAAATCAGCTTGAAACTGCAGTCTGGTTTATGGTTCATGTATGCATGGCCAAATTAGCACAAGTCAACTGCTAATGATGACATAATTTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU93966 True 5507 TUCP 0.41 2 9329329 9334948

Neighbor

gene id symbol gene type direction distance location
CI01000013_09279917_09290301 TSPAN33B coding upstream 38569 9279917 ~ 9290760 (+)
CI01000013_09243644_09260619 TSPAN9A, TSPAN9B, TSPAN9, TSN9 coding upstream 68710 9243644 ~ 9260619 (+)
CI01000013_09178561_09180465 NA coding upstream 148172 9177107 ~ 9195268 (+)
CI01000013_09075883_09113011 NA coding upstream 216046 9075825 ~ 9113283 (+)
CI01000013_08943859_08944315 NA coding upstream 384704 8942838 ~ 8944625 (+)
CI01000013_09430170_09443518 RBM28 coding downstream 95222 9430170 ~ 9444023 (+)
CI01000013_09681047_09683275 LRRC4, LRRC4.2 coding downstream 346099 9681047 ~ 9683433 (+)
CI01000013_10261599_10283287 NA coding downstream 925323 10260271 ~ 10283967 (+)
CI01000013_10335904_10336688 NA coding downstream 1000956 10335904 ~ 10336896 (+)
CI01000013_10502138_10525511 GRM3 coding downstream 1165742 10500690 ~ 10525674 (+)
G82639 NA non-coding upstream 89744 9239381 ~ 9239585 (+)
G82638 NA non-coding upstream 92121 9236988 ~ 9237208 (+)
G82620 NA non-coding upstream 190884 9136983 ~ 9138445 (+)
G82612 NA non-coding upstream 254753 9065133 ~ 9074576 (+)
G82580 NA non-coding downstream 31899 9366847 ~ 9388557 (+)
G82659 NA non-coding downstream 35560 9370508 ~ 9372174 (+)
G82666 NA non-coding downstream 46107 9381055 ~ 9384143 (+)
G82676 NA non-coding downstream 61984 9396932 ~ 9397195 (+)
G82694 NA non-coding downstream 103264 9438212 ~ 9478994 (+)
G82168 NA other upstream 1287986 8028338 ~ 8041343 (+)
G81994 NA other upstream 1991090 7335945 ~ 7338239 (+)
CI01000013_06076169_06080164 NA other upstream 3246962 6075400 ~ 6081684 (+)
CI01000013_06050285_06059640 NA other upstream 3269833 6049864 ~ 6060269 (+)
G80845 NA other upstream 4493097 4835078 ~ 4836232 (+)
G84005 NA other downstream 266663 9601611 ~ 9602235 (+)
G84194 NA other downstream 695660 10030608 ~ 10036953 (+)
G84215 NA other downstream 741506 10076454 ~ 10079336 (+)
G84250 NA other downstream 880179 10215127 ~ 10215962 (+)
CI01000013_10756927_10790192 FRMD4A other downstream 1437338 10756927 ~ 10792761 (+)

Expression


Co-expression Network