G82694


Basic Information

Item Value
gene id G82694
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 9438212 ~ 9478994 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU94080
CATGAACTGTTTGGTTACCAACTATCTTAAAAATATCATCTTTTGTGTTCAACTGGAGGGTGAGTAAACGATGACAATTTTATTTTTTGGGCGAACTATCCCTTTAAATCTTTCTATTTCAGTGCATTGTTAATGACTGAAATCGCCACTGGCACCTCTAACAGCTAACTTACACCAGAGCTTTTTTTTTTTTTTTTTTTACAGAATAAGCTAATTATAGCATAACTTTTTCATATATCCAATTCCTCTTCATTTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU94080 True 258 lncRNA 0.31 2 9438212 9478994

Neighbor

gene id symbol gene type direction distance location
CI01000013_09279917_09290301 TSPAN33B coding upstream 147452 9279917 ~ 9290760 (+)
CI01000013_09243644_09260619 TSPAN9A, TSPAN9B, TSPAN9, TSN9 coding upstream 177593 9243644 ~ 9260619 (+)
CI01000013_09178561_09180465 NA coding upstream 257055 9177107 ~ 9195268 (+)
CI01000013_09075883_09113011 NA coding upstream 324929 9075825 ~ 9113283 (+)
CI01000013_08943859_08944315 NA coding upstream 493587 8942838 ~ 8944625 (+)
CI01000013_09681047_09683275 LRRC4, LRRC4.2 coding downstream 202053 9681047 ~ 9683433 (+)
CI01000013_10261599_10283287 NA coding downstream 781277 10260271 ~ 10283967 (+)
CI01000013_10335904_10336688 NA coding downstream 856910 10335904 ~ 10336896 (+)
CI01000013_10502138_10525511 GRM3 coding downstream 1021696 10500690 ~ 10525674 (+)
CI01000013_10586449_10594082 NA coding downstream 1106824 10585818 ~ 10594442 (+)
G82676 NA non-coding upstream 41017 9396932 ~ 9397195 (+)
G82580 NA non-coding upstream 49655 9366847 ~ 9388557 (+)
G82666 NA non-coding upstream 54069 9381055 ~ 9384143 (+)
G82659 NA non-coding upstream 66038 9370508 ~ 9372174 (+)
G82639 NA non-coding upstream 198627 9239381 ~ 9239585 (+)
G83958 NA non-coding downstream 84060 9563054 ~ 9563353 (+)
G84005 NA non-coding downstream 122782 9601611 ~ 9602235 (+)
G84023 NA non-coding downstream 180313 9659307 ~ 9659737 (+)
G84046 NA non-coding downstream 272617 9751611 ~ 9751958 (+)
G84134 NA non-coding downstream 326792 9805786 ~ 9805985 (+)
G82581 NA other upstream 103264 9329329 ~ 9334948 (+)
G82168 NA other upstream 1396869 8028338 ~ 8041343 (+)
G81994 NA other upstream 2099973 7335945 ~ 7338239 (+)
CI01000013_06076169_06080164 NA other upstream 3355845 6075400 ~ 6081684 (+)
CI01000013_06050285_06059640 NA other upstream 3378716 6049864 ~ 6060269 (+)
G84194 NA other downstream 551614 10030608 ~ 10036953 (+)
G84215 NA other downstream 597460 10076454 ~ 10079336 (+)
G84250 NA other downstream 736133 10215127 ~ 10215962 (+)
CI01000013_10756927_10790192 FRMD4A other downstream 1293292 10756927 ~ 10792761 (+)

Expression


Co-expression Network