G84180


Basic Information

Item Value
gene id G84180
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 9918097 ~ 9918334 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU95754
GCTCAGAGTTCTGCATTCTGGCATGTTCCTTCTGCATGGCCCCTGTGCAGTGTTGCAAGAGTAAAACTCATAATATATCTCACAATCCTTCGTGCCACAGACCTGAATGATACATCAAATCTTGTGGCTTGTTGAGGAGAAGTGTGCTATTACTTTTAAAAGAAATTGGGCATGTGATTATCTCATAGATATACATTGGAGAAGGGACCTGGACCATATCTAGGGACCAGAATATCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95754 True 238 lncRNA 0.42 1 9918097 9918334

Neighbor

gene id symbol gene type direction distance location
CI01000013_09681047_09683275 LRRC4, LRRC4.2 coding upstream 234664 9681047 ~ 9683433 (+)
CI01000013_09430170_09443518 RBM28 coding upstream 474074 9430170 ~ 9444023 (+)
CI01000013_09279917_09290301 TSPAN33B coding upstream 627337 9279917 ~ 9290760 (+)
CI01000013_09243644_09260619 TSPAN9A, TSPAN9B, TSPAN9, TSN9 coding upstream 657478 9243644 ~ 9260619 (+)
CI01000013_09178561_09180465 NA coding upstream 736940 9177107 ~ 9195268 (+)
CI01000013_10261599_10283287 NA coding downstream 341937 10260271 ~ 10283967 (+)
CI01000013_10335904_10336688 NA coding downstream 417570 10335904 ~ 10336896 (+)
CI01000013_10502138_10525511 GRM3 coding downstream 582356 10500690 ~ 10525674 (+)
CI01000013_10586449_10594082 NA coding downstream 667484 10585818 ~ 10594442 (+)
CI01000013_10756927_10790192 FRMD4A coding downstream 838593 10756927 ~ 10792761 (+)
G84179 NA non-coding upstream 434 9916805 ~ 9917663 (+)
G84171 NA non-coding upstream 14175 9901108 ~ 9903922 (+)
G84167 NA non-coding upstream 28414 9885667 ~ 9889683 (+)
G84163 NA non-coding upstream 53509 9864388 ~ 9864588 (+)
G84162 NA non-coding upstream 53933 9863845 ~ 9864164 (+)
G84181 NA non-coding downstream 1690 9920024 ~ 9920246 (+)
G84194 NA non-coding downstream 116867 10030608 ~ 10036953 (+)
G84216 NA non-coding downstream 161099 10079433 ~ 10081200 (+)
G84217 NA non-coding downstream 163960 10082294 ~ 10084049 (+)
G84242 NA non-coding downstream 199280 10117614 ~ 10117854 (+)
G84005 NA other upstream 315862 9601611 ~ 9602235 (+)
G82581 NA other upstream 583149 9329329 ~ 9334948 (+)
G82168 NA other upstream 1876754 8028338 ~ 8041343 (+)
G81994 NA other upstream 2579858 7335945 ~ 7338239 (+)
CI01000013_06076169_06080164 NA other upstream 3835730 6075400 ~ 6081684 (+)
G84215 NA other downstream 158120 10076454 ~ 10079336 (+)
G84250 NA other downstream 296793 10215127 ~ 10215962 (+)
G84768 NA other downstream 2251655 12169989 ~ 12170818 (+)

Expression


Co-expression Network