G84216


Basic Information

Item Value
gene id G84216
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 10079433 ~ 10081200 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU95796
CTCTGTTTGATGGGGAGTTGGGTTGAATCCACAGAGGTTACAAACAATGTTCTTACACTCAGTGCAGGTACTGTAGTTAGGAGTGTCCTGTGAACCTACATTAAGATCCACTTTGCAAAGAGGACATGCTTTGGTCTCTGCTTTAGGAGCTACAGCTGCTACTACCAAAGCTTCAGATACTGCTGTAGCCTGTTGCACCTGCTTCTCATCTGTTTTTTCCTCCTTTGGTGTCTCTGGTGTTGGTGTAGTCTTTACTGAAGTTTGAGAAACCACAGATGCCTTGTGAGACGTTGGTGGTGTTGTGGTCTTTGCAGATGTTTCAGAAGATGTGAAAGACTTTTGAGAAGTTGGTGGCAATGTGGAGGACTCATCTTGAACGGCTGAGGAGATTAGATTAGATGCAGAGTTCAAAAAGGAGGATCCAAAGCCCAGAACCTTCCCAGGGACAACAGTCACAGAGGGCTGAGGGGATCCAGATCGAGCACCACCAAAACCAAAGCTAAAGAAACCTGTTTCCTCTTTAGAAGGTTCTGGTTTCTGTGGTACAGCAGATTTTGTAGAAGGATCAAGTTTTGGCATTTCAGTTGGTTGTGTTGTAGCTTGTGTGGGTTTGTTCTCGTCATTCTCTGTAGCAATTGATGTCCTTTTCTTTCCAATGACATCTGGCTTATTTTGTGGAGAAACTGAAATTGGAGCAGGTATGAGAGCCTCCTTTTTTTCCGGTATTGTTGGTGGAGATGCTTTTCTAATCTGTGGCTGTGGTTGGGTAGAGGGAGATCCTTGTGCTTTCTTCACCTGGCAGTTTAAACACAGCCATTCTTTAACCTCAGTTTGATGTGGCATGGGATTAAATCCACAAAGATTGCACACGGTGTTCTTGCATTCAGTGCAGGTGTTATAATTTGGAGTGTCCCAGTTTAAGTCCACTTTACAGAGTGGACAGGACTTTGGAAGCTCCGGGGCTGGTTTGTTAATTTTCACATTAGTGACTGGTTCTTTGGACATCTCATCTTGTGGTTTATTCTCGACTGTTTTCTTTTCATCCCGTTTCTGTACAGCGGTAAGTTTGGCCTCTTCTGGCAGTTTAGTTTTTTGTGTGGTTTGTGAAGCTTCTGAACCTTTTCGAGAAGTTGGTGGTGTTGGTGTTGTCTTAATAGAACTTTGGGACACAGTGGATCCCTTACGAGAACTTGGTGGAGTTTTGGTGGACGACTCATCCTGAACGGCTGATGATATCAAATTAGATGCTGAACTGAGGAAGGAAGACCCAAAACCCAGAACTTTCTCAGAAACAGCAGACTGAGGAGAAGGTGACCGAGATCGAGCACCTCCAAAACCAAAGCCAAAGAAACCAGACTCTTCCTTAGTCTGTTCAACTTTAGATGACGGAGCAGGTTTGGAAGGAGATGCATCACCTTTAGACTTCTGAGCATTTGGTGCAGGAGTAATTATAGGCTTTTTAGTCTCTGTTGGAGGTTTCTTGTCCTGCTCAGCTGGAACATTCTGCAGTTTTTCTGGAGAAGGTGGATCTTGAGTTGCTTTCTTTTGTGGAGATGCTGGTTGTATTTTGTTAGATTGTGGTTGTGGCTGAGCAGGGGGAGGTCCTGAAGTTCTCTGTACCTGGCAGGTCAAACATAGCCACTCCTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95796 True 1649 lncRNA 0.45 2 10079433 10081200

Neighbor

gene id symbol gene type direction distance location
CI01000013_09681047_09683275 LRRC4, LRRC4.2 coding upstream 396000 9681047 ~ 9683433 (+)
CI01000013_09430170_09443518 RBM28 coding upstream 635410 9430170 ~ 9444023 (+)
CI01000013_09279917_09290301 TSPAN33B coding upstream 788673 9279917 ~ 9290760 (+)
CI01000013_09243644_09260619 TSPAN9A, TSPAN9B, TSPAN9, TSN9 coding upstream 818814 9243644 ~ 9260619 (+)
CI01000013_09178561_09180465 NA coding upstream 898276 9177107 ~ 9195268 (+)
CI01000013_10261599_10283287 NA coding downstream 179071 10260271 ~ 10283967 (+)
CI01000013_10335904_10336688 NA coding downstream 254704 10335904 ~ 10336896 (+)
CI01000013_10502138_10525511 GRM3 coding downstream 419490 10500690 ~ 10525674 (+)
CI01000013_10586449_10594082 NA coding downstream 504618 10585818 ~ 10594442 (+)
CI01000013_10756927_10790192 FRMD4A coding downstream 675727 10756927 ~ 10792761 (+)
G84194 NA non-coding upstream 42480 10030608 ~ 10036953 (+)
G84181 NA non-coding upstream 159187 9920024 ~ 9920246 (+)
G84180 NA non-coding upstream 161099 9918097 ~ 9918334 (+)
G84179 NA non-coding upstream 161770 9916805 ~ 9917663 (+)
G84171 NA non-coding upstream 175511 9901108 ~ 9903922 (+)
G84217 NA non-coding downstream 1094 10082294 ~ 10084049 (+)
G84242 NA non-coding downstream 36414 10117614 ~ 10117854 (+)
G84202 NA non-coding downstream 42560 10123760 ~ 10127752 (+)
G84265 NA non-coding downstream 105333 10186533 ~ 10187657 (+)
G84289 NA non-coding downstream 171974 10253174 ~ 10254259 (+)
G84215 NA other upstream 97 10076454 ~ 10079336 (+)
G84005 NA other upstream 477198 9601611 ~ 9602235 (+)
G82581 NA other upstream 744485 9329329 ~ 9334948 (+)
G82168 NA other upstream 2038090 8028338 ~ 8041343 (+)
G84250 NA other downstream 133927 10215127 ~ 10215962 (+)
G84768 NA other downstream 2088789 12169989 ~ 12170818 (+)
G84790 NA other downstream 2103742 12184942 ~ 12201975 (+)
G84864 NA other downstream 2283849 12365049 ~ 12375905 (+)

Expression


Co-expression Network