G323836



Basic Information


Item Value
gene id G323836
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NW_019172900.1
NCBI id APWO02000129.1
chromosome length 294554
location 28020 ~ 28318 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU445914
tttcctgacgccggagcccagcggaagtgccatcgcaagcggtgcgagcgtaagcggaagcgcggaaagagagccgggatccgcgcgaggctaaaggctagtcctagccggccggctataccatcgctctttctggcaaacgtctgttcccttgacaataaactggactacatccgactccagcgaactacccagcgtgagttcagagactgctgtgctttggtttttgtggaatcgtggctgaacgacaacattccggacagcgccattcagctagccgggctaaccgcgttcagagc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU445914 True 299 lncRNA 0.58 1 28020 28318

Neighbor


gene id symbol gene type direction distance location
med4 med4,LOC107673119,LOC107709409,LOC107724027,LOC107601074,LOC107675337 coding upstream 27575 55893 ~ 61084 (-)
LOC103028530 NA coding upstream 34725 63043 ~ 73490 (-)
LOC111191691 NA coding upstream 46438 74756 ~ 88024 (-)
LOC103042938 NA coding upstream 69248 97566 ~ 99679 (-)
cnot11 cnot11,LOC106582250 coding upstream 100519 128837 ~ 135027 (-)
LOC111191692 NA non-coding upstream 24576 52894 ~ 54591 (-)
G323902 lcp1,LOC108439517,LOC107732195,LOC107660271,LOC107740717,LOC107685450 non-coding upstream 95298 123616 ~ 127776 (-)
G323904 rpl31,LOC102795706,LOC106575914,LOC105022559,LOC106582252,LOC106586486,LOC107740715 non-coding upstream 107682 136000 ~ 139374 (-)
G323906 NA non-coding upstream 112014 140332 ~ 147574 (-)
G323909 NA non-coding upstream 135591 163909 ~ 164575 (-)
lrrc63 NA other upstream 75640 103958 ~ 112037 (-)
nms nms other upstream 146656 174974 ~ 179325 (-)

Expression



Co-expression Network