G323906


Basic Information

Item Value
gene id G323906
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172900.1
NCBI id APWO02000129.1
chromosome length 294554
location 140332 ~ 147574 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU446036
GTATCGTATAGTTCTTTAGTCCGCTCACTAATCTGCGgtgtgaaaccgaaactaactgaactaaatataaatttacACACTGTAACTGTAAACACCTGAACCTCGGTGTGAAGACTTTAGACtaaacagaaatcatatttttattttcatttcccCACAGGAAGCTGTttgtggactattctcagtccagcagttacactgaggtgtttaaaaactccagcagcactgctgcatctgatccacaaatactgtactttactataaAGCTCTATCCAGATGTGATTattttctgtgaaaaatatttcactcttcttctctttagtgacaaaactcctgcatccggactgcaattgtaaaaacaggaggatcagtgaattttctcagaggacgtctgagaaataaaacacctacatgatcgttctggacgggaataaaatcacagaggataaaaaaacccataaaagagaaaattacccagaaccccctgagaaagtaatcctgtctggataggaCTTTAGGTTGGCAGCATGAATGTAGCCAAAATTCTCAGTTATTATTACACCAAATGCTTgataaatacactgcctgatgcCTTCAACACTGTTTTACTGAGTTTTGGGAAGATTTTGGGTCTAAAACCTTGTTTAGCATTAAATGTATGATAGTGGAGGGATACATGCAGAGTGcagagtggcaaaaaaaaaaaatacagttcccaaagaaaacttttttttttttcccagttttgCCTTAATTTTACCATCAACAACATTCCACAGATAAATACACATGTAGCGTCACAGGTGGGTTTGGATGGTGAAAAAAACTGCAGTTTTTGTTTGTAGATGTGGCTGTAAAAACCAGAATATTAAAAGTAGTGCCTTATCTATTATTTGCCACAACTTCTATTACTAACAGCTCCCCAACGTTGCTTGTTGTTCACATGCTGATTTCTGTTGCAAAAAAGCGATTTTGTTTActgtgatgcatttttttataaacagagAACTCTGTACCTGTAACACAGGAAGTTCAGTGAAGtattactttacattaaaaacaatcaGTTTTATGCTATACTGTACAGAAAACTACACGCTGAGATCTGTAATCCTTCATCTTAAGCTGatgataaaagagagagatatattcAAGACTTTAAAGGAGAATGTGCCTTAAAATAATCCAGTTTGGTTTTGGAACAGATGCAGCTccagaaaatgtttttctacttttgttttagGACCAACTCATCAATCTGAAGTTCTTTGAGCCTTGTTTGTACTGTATCTTCATTTATATGTTGGTTTactttcaaaataataaaagaaaatgaacaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU446036 True 1344 lncRNA 0.35 2 140332 147574

Neighbor

gene id symbol gene type direction distance location
trnal-caa_87 NA coding downstream 4881 135342 ~ 135451 (-)
cnot11 cnot11,LOC106582250 coding downstream 5305 128837 ~ 135027 (-)
LOC103042938 NA coding downstream 40653 97566 ~ 99679 (-)
LOC111191691 NA coding downstream 52308 74756 ~ 88024 (-)
LOC103028530 NA coding downstream 66842 63043 ~ 73490 (-)
edar edar,LOC107566566 coding upstream 69779 217353 ~ 271612 (-)
G323904 rpl31,LOC102795706,LOC106575914,LOC105022559,LOC106582252,LOC106586486,LOC107740715 non-coding downstream 958 136000 ~ 139374 (-)
G323902 lcp1,LOC108439517,LOC107732195,LOC107660271,LOC107740717,LOC107685450 non-coding downstream 12556 123616 ~ 127776 (-)
LOC111191692 NA non-coding downstream 85741 52894 ~ 54591 (-)
G323836 NA non-coding downstream 112014 28020 ~ 28318 (-)
G323909 NA non-coding upstream 16335 163909 ~ 164575 (-)
G323911 NA non-coding upstream 25367 172941 ~ 196305 (-)
G323917 NA non-coding upstream 47827 195401 ~ 210415 (-)
lrrc63 NA other downstream 28295 103958 ~ 112037 (-)
nms nms other upstream 27400 174974 ~ 179325 (-)

Expression


Co-expression Network