G323911


Basic Information

Item Value
gene id G323911
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172900.1
NCBI id APWO02000129.1
chromosome length 294554
location 172941 ~ 196305 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU446042
aagagagcacttcagtttctgaatcagtttctctgattttactatttataggtttatgtttgagtaaaatgaacattgttgttttattctataaactacggacaacatttctcccaaattacaaataaaaatattctcatttagagcatttatttacagaaaatgagaaatgactgaaataacaaaaaagatgcagagctttcagacctcaaataatgcaaagaaaacaagttcatattcataaagttttaagagttcagaaataatcaatatttggtggaataaccctggttggtttttaatcacagtttttttttcatgcatcttggcatcatgttctcctccaccagtcttacacactgcttttggataactttatgctgctttactcctggtgtaaaaattcaagcagttcagtttggtggtttgatggtttgtgatcatccatcttcctcttgattatattccagaggtttttaatttggtaaaatcaaagaaactcatcatttttaagtgtctcttattctttcccagagctgtatatttacacaaaaggcaattaaacaaaaaacaatcatAAATCAAAAGCAATTTTATTGTGACAGACTATGAAAAGATTTATATAAAAACCGTTCAGGTAAGAGACgtaaacatgtaaataaattatacatgCCATAAATAAAATCTGCTATTTATTATGATGTGGCACTTCCTGTTGATCCAGGTTCTCTCAGGCTTCGCTTCAGAGTGTAGTTCTTCAGTTTAACCACTAGAGATCACACTTCTCCATTTTATATCATGGTAAATTTTTATATAAAGtgaatttttgtttgtttcttcatTCTGGAAATGAAAATCAAGTGACAAAAGACGTTAAGATGTTGTGCTACAGGATGTCGATGGTGATGATTTACTAACGATGctgtttactttaatttaacatATTACAGTCCCACAAACATGATTAACTAGTTATGATGTTTGTGAGGTGAATAAAAGCCATTTTCTGTATCCAAACAACGTAATTTTTGTTAAATCTGACCAGATCAGTTACCAAATGCTTTTTaggcaaaataataataaattttgcAAAGGCTAGGTACGCATTTTTTTGTGGAAGAGAATGAGTAACTCCCTGTTCTTGATTATGCATTAAACTTAGGCCACTGGCATTAATAATAAGCTTTTTTCTCATCTGGTAAGCAGCAATAATGTGCAAAAAGAAATCCTTAATAATCACTCTGTTTTTTACCATGATTTATCACCACTTAACTAATACTAAACACATCTGACTAATAATAGACTACAAAACTACTGCATCAGTTGGTCTGttctttattatgtattatgtattgcTGTTATTGAGtatttaatctaatttataataaaaaaaaataagaaacagttTTATCATCGTCATATGCAGCATAATATATACTAACGTCTTTGTCACTTGCAGCACTTTCAGCTGACAGAAACCTGAAAATGGGTCaaacaaaaattacattaatcaaaaattacatttaaatcaaaAGCTGTGATGGGTATGAATCATTTTGGGCTTCACTGTTCgtcctttaaaaacactttatacattttctaaaaCTGACAGCAGCTGTGTTTTCTAGAGAAACAtgttgaccaaaaaaaatcttggcaccattaaaaaaaaaagcgtttTATTGTCAGGTGTGACTCTCTGCAGGTCTCCGGTCCTGCTGATTTCTCCCTCAGGAGGTTCAGTCCTCATCAGATTCATCACTGTCTTTACGGTTTGGCATCGAACAGCGTATGGACGTCAGCAGCTGATCCTGGATCTGTTTCTTAGGGTTCTCCTCGAGGTCAGTCTTCACAGCTCCAGACTCAGACAGCCGCCACTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU446042 True 1880 lncRNA 0.33 2 172941 196305

Neighbor

gene id symbol gene type direction distance location
tbc1d8 tbc1d8 coding downstream 5505 141909 ~ 167436 (-)
trnal-caa_87 NA coding downstream 37490 135342 ~ 135451 (-)
cnot11 cnot11,LOC106582250 coding downstream 37914 128837 ~ 135027 (-)
LOC103042938 NA coding downstream 73262 97566 ~ 99679 (-)
LOC111191691 NA coding downstream 84917 74756 ~ 88024 (-)
edar edar,LOC107566566 coding upstream 21048 217353 ~ 271612 (-)
G323909 NA non-coding downstream 8366 163909 ~ 164575 (-)
G323906 NA non-coding downstream 25367 140332 ~ 147574 (-)
G323904 rpl31,LOC102795706,LOC106575914,LOC105022559,LOC106582252,LOC106586486,LOC107740715 non-coding downstream 33567 136000 ~ 139374 (-)
G323902 lcp1,LOC108439517,LOC107732195,LOC107660271,LOC107740717,LOC107685450 non-coding downstream 45165 123616 ~ 127776 (-)
LOC111191692 NA non-coding downstream 118350 52894 ~ 54591 (-)
lrrc63 NA other downstream 60904 103958 ~ 112037 (-)

Expression


Co-expression Network