G323917


Basic Information

Item Value
gene id G323917
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172900.1
NCBI id APWO02000129.1
chromosome length 294554
location 195401 ~ 210415 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU446054
TCTGAGTCTGAATTCAGTCACGCTGTCAGCTCTCTACTGACAACCAATTACAAACCCATCAGTCCTCACTACACTCTCCCACACTGCAGCTTCACATCCAGAGCTTCACAATTACACTTCTTATTCAATAActcttattaaaatgatttctgGATTCTTTACATATTCAAGGCCGATTCAGAGGCTATATCTTACACAGATTTATGTGAAGTATTGCACAGTTCTAATAAGAAAACACTGTCTGAAGCCCTCTGCTTACCAGAGCTTTATCTTAACATGTTTCTTTAATATCCAATGTTGATATATATCCATCTTGATCATGTTATTACAGTTACTACAGAAATTATAATCCTTAACAATCCTTTAACATCAAGTTAATGTTAGCAGCCATTTAAAAAGATGTGCTGGAGCTTCTTTTCATCCCTAAAGACACTTTAACATGTGCTACTAGCGCTGCACAATATTGGTCTTTTGCGACAATATACATTGCGATATTAAACTATACAGCCCCTCCCCCACTTGTGTGCTTGTTTGTGCGTCTTGTTTCAGCCAATGactcaaaacccgagaaaaacagcaaaactacaGTAATTGGCCCTTTGatcagcatttaaatgtctttttaaaaggtaaataagattaaaaataagtttttctgggattaaaagtgtgaattcagctgtaactggaaatatctgcgctgctaaactgtgctggactgaagagcacagctttccacatgtGCTCACgcttacaagcacgtgcccaaccatgtggatggaggctaTGGTTACCTTGggtttagaaaaatataaaaagacatTGAGTTTAAGGATTCTTTCATCAGTTTTTAACTTCATGTATCCAGTGCAGTCATGCATTCAGAAACACCATATTAAACTACACAGCTCCAAACTCACAGTTCAGCTCAGAGATCTGTGAAATCTCTCACTGAGTTCTGGAGTTCTGGTCTGTCTAATATAATTCAATCTTAGTGTTGGAGCACATTCTGTCCAAAAGGTCTAATGGTGTCTGCCAGGGTTCTGGTTTTGGACCTCTAGCTTTCTTTAAGGGAaagcacagagacacacagaaaacacaggttcaCAAAGACAATTCTAAACTCAACACTCAAATCTCCATCTGTAACTCAGGCCTGGAACCCACCCAGCCTGAATCCACATCCATCATCCTGCTAACCATGAGCCGACCACTCCAGCAGAGTCAGAGCACTGAAAGACGAGGAACAACTGCAGTCAAACCCCCACAGATCCTGAACTCCTCCAGATTAAACCAACGaccaaacacagaaacactgatcAGCTTCAGGAACTGAGAAACTCCTCACCCTCTATAAACAACCTGATAACAGGAGTGGAAAAGTACAAACGGTGACTGTGAAGTGCTGATTTTAGCACTAGCTATGGAAAAAGAGGGTTATACACGCCAcgttaaaacagaaataaacattttattcaataacaaaacaaaccacAGAAACAGTCTCTCAAAACCACATTTATACAAATTTAccccaaaatataaatatatgaaaacgTCTCTCACACAGCTCACGAACAGCCAAATCACTGAGCCAGTAAATCTCAATTAAACTCAATCACAAACTCTGACTTTAAATCAGCATATATATACTGGAATATTTATGCTTTTTTGCTTATTGATCCAAATTAAGGCAGCATGACAACACCACAATTTCAGAATTAGCCAGAGTTTATAACTATGATTAATGCATTTCAGTCCATACcatcaataaatcaattataGCTCCGTGATTTGGTCAGGAGTATACTTTTTTATGCTGACACTGTAGCCACAATCTACTAAGTAAACAACTTGTTATCTGGGGCATTTGGTGCCATAAACCACATCTAAATAAgtctattaatatttagtgaaCAGCATTACACAGTTTGATGAGTGTGTATCACATTCTGTACACATACCTacattggtaccactttaaaataagtctccttttatatagtttataaaggagtttttttaatgaggttataaaccattaataagcagttataacacagatagaaagggcaacagtggcctgtcATTTACCAAATATAGTGATTGTAGTGAATgttcatttatactgtttaacctcagatcttactagattcttatcttattttgtctttttatcagTCAACGTTAACttaatttctgttaataactttattaatttaactataaaaacatatcaaatGGCTAAACTGACTTAAATTATtctctatattattattagatatgttaaagTTAAGTTAATTGTCACTGCTGTTCTCTCTATGTGTTGTaagtgattattattaatgtttttttttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU446054 True 2362 lncRNA 0.36 2 195401 210415

Neighbor

gene id symbol gene type direction distance location
tbc1d8 tbc1d8 coding downstream 27965 141909 ~ 167436 (-)
trnal-caa_87 NA coding downstream 59950 135342 ~ 135451 (-)
cnot11 cnot11,LOC106582250 coding downstream 60374 128837 ~ 135027 (-)
LOC103042938 NA coding downstream 95722 97566 ~ 99679 (-)
LOC111191691 NA coding downstream 107377 74756 ~ 88024 (-)
edar edar,LOC107566566 coding upstream 6938 217353 ~ 271612 (-)
G323909 NA non-coding downstream 30826 163909 ~ 164575 (-)
G323906 NA non-coding downstream 47827 140332 ~ 147574 (-)
G323904 rpl31,LOC102795706,LOC106575914,LOC105022559,LOC106582252,LOC106586486,LOC107740715 non-coding downstream 56027 136000 ~ 139374 (-)
G323902 lcp1,LOC108439517,LOC107732195,LOC107660271,LOC107740717,LOC107685450 non-coding downstream 67625 123616 ~ 127776 (-)
LOC111191692 NA non-coding downstream 140810 52894 ~ 54591 (-)
nms nms other downstream 16076 174974 ~ 179325 (-)
lrrc63 NA other downstream 83364 103958 ~ 112037 (-)

Expression


Co-expression Network