LOC103042938


Basic Information

Item Value
gene id LOC103042938
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172900.1
NCBI id APWO02000129.1
chromosome length 294554
location 97566 ~ 99679 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007235506.3
TGGAATGCTGGGAATCCCGGGAATAAAAGAATCGGAGAGTCGACTCCCAGCCCGACTCtgagctaacagcagcagggtTAGCAGAGCTGGAGTAAAACTcggtaaaaacaaagaactgCAGCTGAGAGAAGTTGGTGAACTCAGTTAGCCTGCGCTAGTAGCTGCAGTTTATCAGGAGAGCAGTCTGGAGAGTGAGGGTGATTGTATTGTAAACATGGGTAAACCAGGAGTTTTCTGCTGCTCTGATTGCGGGAAGAGCTTCACCCGACAGTGTCACCTCGACAGACACCGGCggattcacaccggagagaagccGTTCGACTGCTCGTACTGTGGGATGAGTTTTACTGAAAACGGCGCATTAAAAacccaccagcgcgttcacaccggcgagaaaccgtttcactgcTCCGACTGCGGCAAGAGCTTCAGTCAGGTCAATAACCTGTACcgacaccagcgcgttcacactgacgagaaaccgtttcactgcTCCGACTGCGGCAAGAGCTTCAACCAGCTCAACCACCTCCAGAGACACCAGCTCATCCACACAGGCcggaaaccgtattactgctccgAGTGCGGgagtatttttactttactgacTCATCTGAAAAgacaccagctcattcacaccggagagaaaccgtttcactgcTCCGAATGCCCGAAGACCTTCAGACACAGAACTAGTCTACAAGCACACCGAGAAAAACACACTGCGGGGAAACTCTATCACTGAAAACACACCTATACGGTCCTTTAAGGAAATTTCAAATTCAGTAAATACTagtgcatcaaaaaaaaattgaatatcattgaaaagttactttatttcagtgaatcAGTCAATTCAAAATTCATGTGAAACccatatcatatattatatagatatattaaacgcacaaagtgatctattttaagcatttatttctcttattgtttatt
>XM_007235507.3
CAAAAGTCTGGAATGCTGGGAATCCCGGGAATAAAAGAATCGGAGAGTCGACTCCCAGCCCGACTCtgagctaacagcagcagggtTAGCAGAGCTGGAGTAAAACTcggtaaaaacaaagaactgCAGCTGAGAGAAGTTGGTGAACTCAGTTAGCCTGCGCTAGTAGCTGCAGTTTATCAGGAGAGCAGTCTGGAGAGaaATAGTATATGTGCTGCTTATCATAAGAAACTCATCAGCTCTCCTTCAATCTGTTCTGATTTTCAGTGAGGGTGATTGTATTGTAAACATGGGTAAACCAGGAGTTTTCTGCTGCTCTGATTGCGGGAAGAGCTTCACCCGACAGTGTCACCTCGACAGACACCGGCggattcacaccggagagaagccGTTCGACTGCTCGTACTGTGGGATGAGTTTTACTGAAAACGGCGCATTAAAAacccaccagcgcgttcacaccggcgagaaaccgtttcactgcTCCGACTGCGGCAAGAGCTTCAGTCAGGTCAATAACCTGTACcgacaccagcgcgttcacactgacgagaaaccgtttcactgcTCCGACTGCGGCAAGAGCTTCAACCAGCTCAACCACCTCCAGAGACACCAGCTCATCCACACAGGCcggaaaccgtattactgctccgAGTGCGGgagtatttttactttactgacTCATCTGAAAAgacaccagctcattcacaccggagagaaaccgtttcactgcTCCGAATGCCCGAAGACCTTCAGACACAGAACTAGTCTACAAGCACACCGAGAAAAACACACTGCGGGGAAACTCTATCACTGAAAACACACCTATACGGTCCTTTAAGGAAATTTCAAATTCAGTAAATACTagtgcatcaaaaaaaaattgaatatcattgaaaagttactttatttcagtgaatcAGTCAATTCAAAATTCATGTGAAACccatatcatatattatatagatatattaaacgcacaaagtgatctattttaagcatttatttctcttattgtttatt

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04115 p53 signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007235506.3 False 951 mRNA 0.46 3 97566 99671
XM_007235507.3 True 1026 mRNA 0.45 3 97566 99679

Neighbor

gene id symbol gene type direction distance location
LOC111191691 NA coding downstream 9542 74756 ~ 88024 (-)
LOC103028530 NA coding downstream 24076 63043 ~ 73490 (-)
med4 med4,LOC107673119,LOC107709409,LOC107724027,LOC107601074,LOC107675337 coding downstream 36482 55893 ~ 61084 (-)
cnot11 cnot11,LOC106582250 coding upstream 29158 128837 ~ 135027 (-)
trnal-caa_87 NA coding upstream 35663 135342 ~ 135451 (-)
tbc1d8 tbc1d8 coding upstream 42230 141909 ~ 167436 (-)
edar edar,LOC107566566 coding upstream 117674 217353 ~ 271612 (-)
LOC111191692 NA non-coding downstream 42975 52894 ~ 54591 (-)
G323836 NA non-coding downstream 69248 28020 ~ 28318 (-)
G323902 lcp1,LOC108439517,LOC107732195,LOC107660271,LOC107740717,LOC107685450 non-coding upstream 23937 123616 ~ 127776 (-)
G323904 rpl31,LOC102795706,LOC106575914,LOC105022559,LOC106582252,LOC106586486,LOC107740715 non-coding upstream 36321 136000 ~ 139374 (-)
G323906 NA non-coding upstream 40653 140332 ~ 147574 (-)
G323909 NA non-coding upstream 64230 163909 ~ 164575 (-)
G323911 NA non-coding upstream 73262 172941 ~ 196305 (-)
lrrc63 NA other upstream 4279 103958 ~ 112037 (-)
nms nms other upstream 75295 174974 ~ 179325 (-)

Expression


Co-expression Network