LOC111191691


Basic Information

Item Value
gene id LOC111191691
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172900.1
NCBI id APWO02000129.1
chromosome length 294554
location 74756 ~ 88024 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022667265.1
CTGCGTCACAGAGAGACACAGCTACCGGTCAGAAGAACGGGAACACCGAGAACCTCCGCACCGTCCGCCGCGTCTCCGCTGTTTTACTCGGTACAATCGCTGCACAGACCGGGACATCATGGTGAAAGTGTCGTTTAACACCGCCCTTGCTCAGAAGGACGTGAAGAAGGACGGAGAGACGCTGATTCCGGTGGAAAAGGACGTCGAGGCTCCGGAGTTTGTGCACCGTCAGCCGCGGGCGTGGTGCTGGTGCTTCTGGCTGGGACTGACCCTCATGTTCTCAGGTGTGGTTGTGGGAGGAGCTTACCTGTACAGGTACTACGTGCTTGAGagtgggCAGGTGTACTGGTGTGGGGTGAAGTATGTTGAGGAGGACTACATGGTGCGGGAGGAGGAGGCGGTGGTGATGGAGGGGTCTCCCGCTGGGCTGCGCTTCATTAAGGAGTCGGTGTTGGTGCtggaggacgaggaggtggaggagatcCACGTACCTGTACCTGAATTCGGAGAGAGCGACCCGGCAGACATCGTTCACGACTTCAACAAGaggCTGACGGCGTATCTGGATCTGAATCTGGATAAGTGTTATGTGATCTCTCTCAACACGTCTGTGGTCATGCCCCCCCGAGACCTGGTGGATCTTCTGGTCAACATTAAGgctgGTACCTACCTGCCGCAGACGTACCTGGTGCATGAGCAGATGATTGTGACGGAGAGGCTGGATGATCTGGATGAGCTGGGATTCTTCATCAGTAAACTGTGCCGAGGAAAAGAGATCTACAGACTGCAGCGCCGCGACACCATACTGGGCATGCAGAAGCGCGAGGCTCCAAACTGCCACAAGATTCGTCACTTTGTGAACAAGTTCGTGGTGGAAACTGAGATCTGCgagctgtgagagagagagaagaaaaagagagagagagagagagagagagaaagaaaaagagagagagagagagagagagagagagagagagacggggggGAGGCGAGAATGCTTCTCTCACACAGCAGCAGCTTTTTTAATTCCACTGCAGTGATCTTTGGATTTTTTAGGCCTTCTTGTATTTTGTAGCTTCAGTGTGAATCTGTGTTCATCTTAAATGGTCTTATTAAACATTACGCTTCTTTAAGCATGAAATAATACTTTCATAGGTTTCTGTACAACATACTCAAATGAGAAGAAGGCCCAGGAGCGTGCGAGAGTGCGTGAgagtgtgcgagagtgtgtgagagtgtgcgaGAGTGCGTGAGAGTGCGCGAGAGTGAGCGTGTGAGAGTGAGCATTTATTATAAGAATGTGATTCTTTATTAATTAGTTAGATCTAAAGGGTCCAAGCACAACTTGTTCTActgatttttgatgttttttctgaATCTCTGCTTTACATTTTCTGAGTGATTTAAGAAAATTGAGATGTTTTGAAATCAGAACTGCACAGTGGTTGGAGGAGAGTAAAcgaatgaatatattttttcaaatttaaagAGTCAGATAGTAAATTCTGCAGTTGGCGTTCATTTTTGTACCACTAAACTATGGTAAAGTCTGCTTTCTGCTTTTCCTCCTGCTGAGTTTATATTCTAAGAATTTATAtatgaatagttaaatttactgaagaaataaaacaataaatgatgtaaaatactgttcaaatgtttgaaatCATTTCTCCTATTGAACCAGTTTTCCAagctaaataatatttttttaaaaataaaagaatatttattattagtgaCAGTTGTGACCACCTAGAAACTAAAGACTCTGAAATTGCACTTccgattaaaaatatatgtagtgaATACGACtaaatacagcaaataaaaactcaactcaactcaacaggTGGTTTTAGGTCATGGATTATtagtttaattactttaattcttctatttgtaataaaaatatgattatagGATGGAAAACTGGGATTACAAACTTTTGAATGGTGGTGTATGATGATAGATTTTTAAGCTACattgtaaaaatgtgaaatttgtgtgatttttcttggttattttctcttttcctgTTGAATATCCATGCAATAACAAAGCTTTCTTAGTAGCTGTGGAGCTCAGTGGTCTGGGTGCTTCAGGATGTTCCACATTGTTCAGAAAGCTGTAAGCtgaatataactgtatataatctttctgtaaaaacaaacccaaaaataaaagtcttaaacttt
>XM_022667266.1
CTGCGTCACAGAGAGACACAGCTACCGGTCAGAAGAACGGGAACACCGAGAACCTCCGCACCGTCCGCCGCGTCTCCGCTGTTTTACTCGGTACAATCGCTGCACAGACCGGGACATCATGGTGAAAGTGTCGTTTAACACCGCCCTTGCTCAGAAGGACGTGAAGAAGGACGGAGAGACGCTGATTCCGGTGGAAAAGGACGTCGAGGCTCCGGAGTTTGTGCACCGTCAGCCGCGGGCGTGGTGCTGGTGCTTCTGGCTGGGACTGACCCTCATGTTCTCAGGTGTGGTTGTGGGAGGAGCTTACCTGTACAGGTACTACGTGCTTGAGagtgggCAGGTGTACTGGTGTGGGGTGAAGTATGTTGAGGAGGACTACATGGTGCGGGAGGAGGAGGCGGTGGTGATGGAGGGGTCTCCCGCTGGGCTGCGCTTCATTAAGGAGTCGGTGTTGGTGCtggaggacgaggaggtggaggagatcCACGTACCTGTACCTGAATTCGGAGAGAGCGACCCGGCAGACATCGTTCACGACTTCAACAAGaggCTGACGGCGTATCTGGATCTGAATCTGGATAAGTGTTATGTGATCTCTCTCAACACGTCTGTGGTCATGCCCCCCCGAGACCTGGTGGATCTTCTGGTCAACATTAAGgctgGTACCTACCTGCCGCAGACGTACCTGGTGCATGAGCAGATGATTGTGACGGAGAGGCTGGATGATCTGGATGAGCTGGGATTCTTCATCAGTAAACTGTGCCGAGGAAAAGAGATCTACAGACTGCAGCGCCGCGACACCATACTGGGCATGCAGAAGCGCGAGGCTCCAAACTGCCACAAGATTCGTCACTTTGTGAACAAGTTCGTGGTGGAAACTGAGATCTGCgagctgtgagagagagagaaagaaaaagagagagagagagagagagagagagagagagagacggggggGAGGCGAGAATGCTTCTCTCACACAGCAGCAGCTTTTTTAATTCCACTGCAGTGATCTTTGGATTTTTTAGGCCTTCTTGTATTTTGTAGCTTCAGTGTGAATCTGTGTTCATCTTAAATGGTCTTATTAAACATTACGCTTCTTTAAGCATGAAATAATACTTTCATAGGTTTCTGTACAACATACTCAAATGAGAAGAAGGCCCAGGAGCGTGCGAGAGTGCGTGAgagtgtgcgagagtgtgtgagagtgtgcgaGAGTGCGTGAGAGTGCGCGAGAGTGAGCGTGTGAGAGTGAGCATTTATTATAAGAATGTGATTCTTTATTAATTAGTTAGATCTAAAGGGTCCAAGCACAACTTGTTCTActgatttttgatgttttttctgaATCTCTGCTTTACATTTTCTGAGTGATTTAAGAAAATTGAGATGTTTTGAAATCAGAACTGCACAGTGGTTGGAGGAGAGTAAAcgaatgaatatattttttcaaatttaaagAGTCAGATAGTAAATTCTGCAGTTGGCGTTCATTTTTGTACCACTAAACTATGGTAAAGTCTGCTTTCTGCTTTTCCTCCTGCTGAGTTTATATTCTAAGAATTTATAtatgaatagttaaatttactgaagaaataaaacaataaatgatgtaaaatactgttcaaatgtttgaaatCATTTCTCCTATTGAACCAGTTTTCCAagctaaataatatttttttaaaaataaaagaatatttattattagtgaCAGTTGTGACCACCTAGAAACTAAAGACTCTGAAATTGCACTTccgattaaaaatatatgtagtgaATACGACtaaatacagcaaataaaaactcaactcaactcaacaggTGGTTTTAGGTCATGGATTATtagtttaattactttaattcttctatttgtaataaaaatatgattatagGATGGAAAACTGGGATTACAAACTTTTGAATGGTGGTGTATGATGATAGATTTTTAAGCTACattgtaaaaatgtgaaatttgtgtgatttttcttggttattttctcttttcctgTTGAATATCCATGCAATAACAAAGCTTTCTTAGTAGCTGTGGAGCTCAGTGGTCTGGGTGCTTCAGGATGTTCCACATTGTTCAGAAAGCTGTAAGCtgaatataactgtatataatctttctgtaaaaacaaacccaaaaataaaagtcttaaacttt

Function

GO: NA

KEGG:

id description
K18264 ITM2B; integral membrane protein 2B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022667265.1 True 2201 mRNA 0.43 6 74756 88024
XM_022667266.1 False 2170 mRNA 0.43 7 74756 88024

Neighbor

gene id symbol gene type direction distance location
LOC103028530 NA coding downstream 1266 63043 ~ 73490 (-)
med4 med4,LOC107673119,LOC107709409,LOC107724027,LOC107601074,LOC107675337 coding downstream 13672 55893 ~ 61084 (-)
LOC103042938 NA coding upstream 9542 97566 ~ 99679 (-)
cnot11 cnot11,LOC106582250 coding upstream 40813 128837 ~ 135027 (-)
trnal-caa_87 NA coding upstream 47318 135342 ~ 135451 (-)
tbc1d8 tbc1d8 coding upstream 53885 141909 ~ 167436 (-)
edar edar,LOC107566566 coding upstream 129329 217353 ~ 271612 (-)
LOC111191692 NA non-coding downstream 20165 52894 ~ 54591 (-)
G323836 NA non-coding downstream 46438 28020 ~ 28318 (-)
G323902 lcp1,LOC108439517,LOC107732195,LOC107660271,LOC107740717,LOC107685450 non-coding upstream 35592 123616 ~ 127776 (-)
G323904 rpl31,LOC102795706,LOC106575914,LOC105022559,LOC106582252,LOC106586486,LOC107740715 non-coding upstream 47976 136000 ~ 139374 (-)
G323906 NA non-coding upstream 52308 140332 ~ 147574 (-)
G323909 NA non-coding upstream 75885 163909 ~ 164575 (-)
G323911 NA non-coding upstream 84917 172941 ~ 196305 (-)
lrrc63 NA other upstream 15934 103958 ~ 112037 (-)
nms nms other upstream 86950 174974 ~ 179325 (-)

Expression


Co-expression Network