LOC103028530


Basic Information

Item Value
gene id LOC103028530
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172900.1
NCBI id APWO02000129.1
chromosome length 294554
location 63043 ~ 73490 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022667271.1
tttttttctcacagggAGCTCGTGCAGTCAGGAGCTTCTCTGCGCGGATGGagatttttagtgttttgtggTGAAATTCtgtgttatttgttattttagtgtaaATTCTGAGGGAATGTTCAGCCGGTTCTCCGCGCGCACGCACGATGAACGAGTACGAGCTGGTCCGGCAGATCGGTCACGGAGCCTACGGGAAAGCGCTGCTGGTCCGCGAGCGCAGCGGGAACGCGCGCCACTGTGTCATCAAACAGATCAGTTGGAGCCGCATGTCTCCTCGAGAAAGAGAAGACTCCAAAAAGGAGGTGACTCTGCTGTCCAAAATGAAGCATCCAAACATTGTGGCTTTCTTCAGGTCATTTAATGaGAGAAATAGTCTGTATATAGTGATGGAGTATTGTGATGGTGGCGACCTCATGAAAAAGATCAGTATGCAGAGAGGACAGCCGTTTAAAGAACAGCAGatAATGGACTGGTTTGTTCAGATTTGTCTTGGGCTGAAACACATCCACGACAGGAAGGTCCTGCACAGAGACATTAAAGCTCAGAATATCTTTCTCACCCAAGGAGGCAGTAAAGTAAAGCTAGGAGACTTTGGGATCGCCAGATTATTAAACAATACGGTGGAGCTCGCCAGGACCTGCGTCGGGACGCCATACTACCTCTCTCCTGAGATCTGCGAGAACCGACCATATAACAACAAAACtgataTGTGGTCTCTTGGCTGTGTTCTCTATGAGCTGTGTACACTCAGACACCCGtTTGAAGGCAGCAGTCTGCGGCAGCTGATAGTGAGGATCTGTAAGGGTTATTATACTCCGGTATCTCAGCGCTACAGTTCTGATCTCAGGACTCTCGTTTCTCAACTTTTTAAAATCAGCCCCAGAGATCGACCCTCCGTCAACTCGCTGCTCAAGCGCCCCCTACTGCACACGCTCATCAGCAAACACCTGCACCctcagCTGATGGAGGAGGAGTTCAGTCACACCGTTCTGCACAGAGTCAAGCCTGTGGCACAGCCAGGCCCCAAGCACAGTGCAGtCTCTAAAGTCTCACCGAGGTCTGGAGGTGCAGTAAATAAGCTCCCGCCTCGACCACCATGGAGACGTGCTGTTACCAAACCTCCCAGCCCTCAGTATAAGCCTGTGCACGGTCATGGAGTGGAAGTGGGAAGAGGCCAGGTATTGAGAGCTGCAGGTGAGGTAAAGGCCGTGCAGAACCTCCGTCCACAGCTGGAGCATCTCCAGCCCCGCCCACATCTTCatcaccctcctcctcctcctcctccagcagcacctGAACCGGAGGCTCCTGCAGGCTGCTGCCCTGAGCGGCTGAATGCTCTGGAGCCGTATCAGCTtgttgcAGCAGCGAGAGAGGAATACCTGCAGAGGAGACAAGAAGCCAATCAGTACAAACTGAGAGCAGAAAAGCAGCTGGGTCTGAGGCCAAACACAGCCGATAGTGAACAGAACAGACGATTAGATCAGAAACATCATCATGCAGAGAGAGACGCTCCACCTCACTGCGTCCTGCAGGACAAACTACACCGACAAGAGGAGTATCTGAGACAGCTGCAGGACATCAGGAGGCGATATCAGGACGAGGTCAGAGTTATGAGACGGAAAGCTGATGCTGAGGTCCAGCTGAAACCAGGAGGCACATACCTGGTGAAGCATCCTGAtgagaaacaaacacacatttccaGAGAAGAGCAACAGAAGcctgctgatatGGAGAAAGCTCTGCAGGAGATTCTAGAGCAGAACcacagagagaggaaagagctgcagagaaaacacaaagacaaGAAAGGAATTATGTTTGAGATCAAACTGCAGGAGAAAGAGCcggagaagaacagagagaaactACAGCAGAAAACTGATGAGGACAAACTGGAGGAGGAGGATCTGCTGAATCAGACGCTGCGGTTTGATGCAGAACTGAAGCTCCAGCTGTGGAACAGATCAGCCGAAGATCCTGACGTCACTGAGGAGGTTAATCCTGAGGAAGGAgtggagggaggaggaggaggaggagaagaagagtgtgtgagaagAGGAGTGTGGAGACGGGAGGCTCCTCAGACTCTGCTGAAAGCTCTGGCCAACATAGAGGTTTCATCCCTCTGCTCTACTGCAGCTTCAACCCAACCCGGTGGAGTGGAGCTGAAGGAGCAGAGGAGGCGGTGGTTAAAGCGAAGGCCGAATACACTCCTCAACGCTTTAGCTGAGGCTCAGCTCACCTTCTCTACACTCGGATCGACCCTCGTATCTGAGAGAGATGACTCAaaggagaagaaagaggaagagaaagaggaggctGCTGAAGGTGTGAAAAGCAGCTCtgcagatgatgatgatgaagatgatgaagatgaggatgaCTCTGATGTGGAGGTGGATGAGGAGAGGCTGGAGCCCAGATCAGACGATGATGATACGAACTTCGAAGAGTCTGAAGACGAGCTGAGAGAGGAGGTCGCTGACTCCATGAGGAATCTCTTCAtcaataatgatgatgatgatgatgaagggcAGAGTGCTGTAGATGGAGATCTCTGTGTGAAAactgaagaggagagagaggagagtaaCGATACAGAGAGAACAGATTCCTCCAGACCTGCAGCTCAGGATCAGGAATCTCATCTCCAGACTGAACAGACTGAGCTTCAGCACCTGAACCCTGAGGAGAACCAGGACCAGAACCAGGACCAGAACCAGGACCAGAACCAGGACCAGAACCAGACCAGAACCAGGACCAGAACCAGGACCAGAACCAGGACCaggaccagaaccagaaccagaaccaggaccagaaccagaaccaggacCAGAACCaggaccagaaccagaaccagaaccagaaccaggaTGTTGGAACAGCAGCGGAGCAGCAGAGACACATCTGATCTCACAGCGTCTCCAGTCTGTTCTCAACCGTTCTCATCACCCGCCGGTCCACCAATCAGGAGTGAGTAA

Function

GO: NA

KEGG:

id description
K08857 NEK1_4_5; NIMA (never in mitosis gene a)-related kinase 1/4/5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022667271.1 True 2984 mRNA 0.51 22 63043 73490

Neighbor

gene id symbol gene type direction distance location
med4 med4,LOC107673119,LOC107709409,LOC107724027,LOC107601074,LOC107675337 coding downstream 1959 55893 ~ 61084 (-)
LOC111191691 NA coding upstream 1266 74756 ~ 88024 (-)
LOC103042938 NA coding upstream 24076 97566 ~ 99679 (-)
cnot11 cnot11,LOC106582250 coding upstream 55347 128837 ~ 135027 (-)
trnal-caa_87 NA coding upstream 61852 135342 ~ 135451 (-)
tbc1d8 tbc1d8 coding upstream 68419 141909 ~ 167436 (-)
LOC111191692 NA non-coding downstream 8452 52894 ~ 54591 (-)
G323836 NA non-coding downstream 34725 28020 ~ 28318 (-)
G323902 lcp1,LOC108439517,LOC107732195,LOC107660271,LOC107740717,LOC107685450 non-coding upstream 50126 123616 ~ 127776 (-)
G323904 rpl31,LOC102795706,LOC106575914,LOC105022559,LOC106582252,LOC106586486,LOC107740715 non-coding upstream 62510 136000 ~ 139374 (-)
G323906 NA non-coding upstream 66842 140332 ~ 147574 (-)
G323909 NA non-coding upstream 90419 163909 ~ 164575 (-)
G323911 NA non-coding upstream 99451 172941 ~ 196305 (-)
lrrc63 NA other upstream 30468 103958 ~ 112037 (-)
nms nms other upstream 101484 174974 ~ 179325 (-)

Expression


Co-expression Network