G51346


Basic Information

Item Value
gene id G51346
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 11204054 ~ 11204423 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU69280
CTGGCGGAGAAGCGCGCTCTCCTCGGAGAAAACGACTCGTTGAGCTCCAGCTCATGCGCCGACACCACGAGCACGACGAGCAGCACGAGCCCTGTCCGCGGcggcatctctctctcttttcctgctcactctctccgtCGCGCGCTACTCAGCAGCAACACCGCGGTGTGTCCTCCTGCAGCACGGCGCTCGCGCTCCGGTGGTGCTGTGTCGTTTGCCGGTGCTGCCGCCGGTTTATGTGTCGAGTTGAGAGTCTCGAGCTCTCGCTTCCTCTCGCTGctgctcttcctcctcctcctcctgctcctttATTctccctcttcttcctcctcctcttcgcTCCTCTTTGCCGGTTTCTCCTCGCGTGCAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69280 True 370 TUCP 0.62 1 11204054 11204423

Neighbor

gene id symbol gene type direction distance location
rhobtb2 rhobtb2,LOC107553166,LOC107678456 coding downstream 163118 11009451 ~ 11040936 (-)
pebp4 pebp4 coding downstream 205603 10873167 ~ 10998451 (-)
egr3 egr3,LOC107678405,LOC107716610,LOC107562644,LOC107710840,LOC107665203 coding downstream 348487 10847449 ~ 10855567 (-)
bin3 bin3,LOC107678406,LOC107710841,LOC107553165,LOC107665194 coding downstream 369454 10757982 ~ 10834600 (-)
LOC103037870 NA coding downstream 566183 10635660 ~ 10637871 (-)
slc25a37 slc25a37,LOC107559458,LOC107710846,LOC107747712 coding upstream 105101 11309524 ~ 11334108 (-)
entpd4 entpd4,LOC107710847,LOC107747713,LOC107698120 coding upstream 144839 11349262 ~ 11361219 (-)
chmp7 chmp7,LOC107710849,LOC107698119,LOC107678414,LOC107559457 coding upstream 158300 11362723 ~ 11368488 (-)
lgi3 lgi3,LOC108426696,LOC107678470,LOC107698096,LOC107559454 coding upstream 168196 11372619 ~ 11400215 (-)
LOC103036914 LOC103036914,LOC108426697,LOC108265400 coding upstream 221555 11425978 ~ 11486584 (-)
G51267 NA non-coding downstream 202046 11001130 ~ 11002008 (-)
G51251 NA non-coding downstream 332581 10871265 ~ 10871473 (-)
G51229 NA non-coding downstream 447012 10672351 ~ 10757042 (-)
G51172 NA non-coding downstream 642972 10553018 ~ 10561082 (-)
G51210 NA non-coding downstream 736595 10467166 ~ 10467459 (-)
G51349 stc1,LOC107678391,LOC107747716,LOC107665189 non-coding upstream 15358 11219781 ~ 11220205 (-)
G51350 stc1,LOC107747716,LOC107665189,LOC107559448,LOC107710824,LOC107553168,LOC107678391 non-coding upstream 16045 11220468 ~ 11223312 (-)
LOC111192721 NA non-coding upstream 63427 11267850 ~ 11277532 (-)
G51360 NA non-coding upstream 141739 11346162 ~ 11361450 (-)
LOC111192722 NA non-coding upstream 325974 11530397 ~ 11534515 (-)
G51187 kansl3,LOC107678435 other downstream 887587 10313482 ~ 10316467 (-)
LOC103023850 NA other downstream 906606 10294056 ~ 10297448 (-)
LOC103022194 LOC103022194 other downstream 917111 10282487 ~ 10286943 (-)
G50495 NA other downstream 3576333 7613381 ~ 7627721 (-)
LOC103033957 cacna1fb,LOC108437577,LOC107668072,LOC107731232,LOC108265065,LOC107695300,LOC107745766 other downstream 3970330 7168118 ~ 7233724 (-)
LOC103042573 cunh1orf21,zgc:92140,LOC107676598,LOC107585858,LOC107750760,LOC107700167 other upstream 627379 11831802 ~ 11881941 (-)
smim24 NA other upstream 2080880 13285303 ~ 13323683 (-)
LOC111192615 ssbp3b,LOC108439398,LOC108265320,LOC107585824,LOC107699856,LOC107710925,LOC107657912 other upstream 2361575 13565998 ~ 13592947 (-)
G51960 glis1 other upstream 2458978 13663401 ~ 13664114 (-)
G52161 NA other upstream 3204513 14408936 ~ 14411611 (-)

Expression


Co-expression Network