G53164


Basic Information

Item Value
gene id G53164
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 18586401 ~ 18667287 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU71687
aacattatgggtgacataccagagttcaaaagaggacaaattgttggtgcacgtcttgctggcacatctgtgaccaagacagcaagtctttgtgatgcatcaagagccacggtatccagggtaatgtcagcataccaccaagaaggaccaaccacatccaacaggattaactgtggacgctgtaagaggaagctgtctgaaagggatgttcgggtgttaacccggattgtatccaaaaaacataaaaccatggctgatcaaatcacggcagaattcaatgtgcacctcaactctcctgtttccaccagaactgtccgtcaccacaatcaattattgtgctctaaaaccaggtgtttcagtttcattgtccaacccctgta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71687 True 380 TUCP 0.45 2 18586401 18667287

Neighbor

gene id symbol gene type direction distance location
LOC103035822 NA coding downstream 916676 17668664 ~ 17669725 (-)
LOC103035515 NA coding downstream 921140 17648451 ~ 17665261 (-)
LOC111192622 NA coding downstream 1109810 17468051 ~ 17476591 (-)
LOC103037795 mpp7,mpp7a,LOC107657298,LOC107665879 coding downstream 1122108 17189815 ~ 17464293 (-)
LOC103024300 mkx,LOC108274364,LOC107665863,LOC107738971,LOC107549415,LOC107584376 coding downstream 1658162 16822247 ~ 16928239 (-)
LOC103028095 itgb3b,itgb3,LOC108430317,LOC107698806,LOC107706862 coding upstream 29707 18696994 ~ 18728233 (-)
LOC111192624 LOC108430317 coding upstream 62756 18730043 ~ 18741304 (-)
LOC111192707 NA coding upstream 455333 19122620 ~ 19143280 (-)
LOC103025356 NA coding upstream 770346 19437633 ~ 19459375 (-)
LOC103036701 LOC108430450 coding upstream 938268 19605555 ~ 19670670 (-)
G53139 NA non-coding downstream 183001 18402279 ~ 18403400 (-)
G53135 NA non-coding downstream 187253 18350272 ~ 18399148 (-)
G53138 NA non-coding downstream 199409 18385769 ~ 18386992 (-)
G52995 NA non-coding downstream 396734 18189467 ~ 18189667 (-)
G52951 NA non-coding downstream 584088 17961546 ~ 18002313 (-)
G53184 NA non-coding upstream 110874 18778161 ~ 18867587 (-)
G53185 LOC108430338 non-coding upstream 111427 18778714 ~ 18786708 (-)
G53199 NA non-coding upstream 181442 18848729 ~ 18892877 (-)
G53209 NA non-coding upstream 260039 18927326 ~ 18927932 (-)
LOC111192726 NA non-coding upstream 450179 19117466 ~ 19120375 (-)
G52652 NA other downstream 1996618 16588150 ~ 16589783 (-)
zcchc4 NA other downstream 2158788 16406719 ~ 16427613 (-)
LOC111192725 NA other downstream 2229441 16343756 ~ 16356960 (-)
G52503 polr2a other downstream 2359227 16226236 ~ 16227174 (-)
LOC103028883 LOC108430093 other downstream 2366554 16161640 ~ 16219847 (-)
LOC103025665 glud1b,LOC108430434,LOC107698813,LOC107700126,LOC107739271,LOC107550058,LOC107749346 other upstream 855415 19522702 ~ 19570378 (-)
G53382 NA other upstream 1182663 19849950 ~ 19850350 (-)
G53562 LOC107396020,LOC107670363,LOC105896953,LOC102778633 other upstream 1954282 20621569 ~ 20690422 (-)
G53598 msh2,LOC107728724,LOC107673650,LOC107582784,LOC107550043,LOC107749362,LOC107698830 other upstream 2116451 20783738 ~ 20787618 (-)
G53607 fbxo11,fbxo11b,fbxo11a,LOC107749363,LOC107550041,LOC107728720 other upstream 2150552 20817839 ~ 20819409 (-)

Expression


Co-expression Network