G53382


Basic Information

Item Value
gene id G53382
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 19849950 ~ 19850350 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU71983
agagaatccacagccacttcaaggacacagGTGACGcacggcgcatgtggcagggcatccaggcaatcaccaactacaggacaatgccaccgtcctgtgaacgtgatgcctccctccctgatgccctgaataacttttatgcacggtttgaggcacaaaacaacacgttggtgagaaagaccatgcccaagccggacgagcaggtgttgtgcctgactgcagtggacgtgaggaacactctgcgcagagtcaacccacgaaaagctgcaggaccagacaacatccccggcagagtgctcagggagtgcgcagaccagctgacagatgttctcacggacatcttcaacatctccctgtgcagcgccactgtcccaacgtgcctcaagtccaccaccatcgtc

Function

NR:

description
carboxypeptidase A1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU71983 True 401 TUCP 0.56 1 19849950 19850350

Neighbor

gene id symbol gene type direction distance location
LOC103034301 prkcea,LOC108430457,LOC108274197,LOC107550054,LOC107739250,LOC107698816 coding downstream 10368 19682391 ~ 19839582 (-)
LOC103036701 LOC108430450 coding downstream 179280 19605555 ~ 19670670 (-)
LOC103025356 NA coding downstream 390575 19437633 ~ 19459375 (-)
LOC111192707 NA coding downstream 706670 19122620 ~ 19143280 (-)
LOC111192624 LOC108430317 coding downstream 1108646 18730043 ~ 18741304 (-)
LOC103035166 six3b,LOC103035166,LOC108429305,LOC107550037,LOC107698799,LOC107582771,LOC107749382,LOC107739239 coding upstream 51943 19902293 ~ 19906073 (-)
LOC103035481 ppm1bb,LOC108430462,LOC107749348,LOC107739221,LOC107698817,LOC107582773,LOC108273990,LOC107550052,LOC107700122 coding upstream 192147 20042497 ~ 20089372 (-)
trnai-uau_7 NA coding upstream 452185 20302535 ~ 20302628 (-)
LOC103047709 LOC108430512,LOC108273982,LOC107582777,LOC107698822 coding upstream 465666 20316016 ~ 20392206 (-)
pigf pigf,LOC107698824,LOC107582779,LOC107749355,LOC107550047,LOC107728710,LOC107700117 coding upstream 691514 20541864 ~ 20556330 (-)
G53380 NA non-coding downstream 885 19848820 ~ 19849065 (-)
G53379 NA non-coding downstream 15584 19833981 ~ 19834366 (-)
G53376 NA non-coding downstream 41936 19807743 ~ 19808014 (-)
G53375 NA non-coding downstream 43451 19806295 ~ 19806499 (-)
G53374 NA non-coding downstream 45236 19804384 ~ 19804714 (-)
G53384 NA non-coding upstream 27144 19877494 ~ 19877718 (-)
G53462 NA non-coding upstream 157597 20007947 ~ 20008162 (-)
G53467 NA non-coding upstream 182504 20032854 ~ 20033088 (-)
G53457 NA non-coding upstream 183013 20033363 ~ 20034632 (-)
G53458 NA non-coding upstream 184416 20034766 ~ 20035491 (-)
LOC103025665 glud1b,LOC108430434,LOC107698813,LOC107700126,LOC107739271,LOC107550058,LOC107749346 other downstream 279572 19522702 ~ 19570378 (-)
G53164 NA other downstream 1182663 18586401 ~ 18667287 (-)
G52652 NA other downstream 3260167 16588150 ~ 16589783 (-)
zcchc4 NA other downstream 3422337 16406719 ~ 16427613 (-)
LOC111192725 NA other downstream 3492990 16343756 ~ 16356960 (-)
G53562 LOC107396020,LOC107670363,LOC105896953,LOC102778633 other upstream 771219 20621569 ~ 20690422 (-)
G53598 msh2,LOC107728724,LOC107673650,LOC107582784,LOC107550043,LOC107749362,LOC107698830 other upstream 933388 20783738 ~ 20787618 (-)
G53607 fbxo11,fbxo11b,fbxo11a,LOC107749363,LOC107550041,LOC107728720 other upstream 967489 20817839 ~ 20819409 (-)
G53996 NA other upstream 3240956 23091306 ~ 23091975 (-)
G54205 kif5b,kif5bb,LOC108430866,LOC107753262 other upstream 4491050 24341400 ~ 24351936 (-)

Expression


Co-expression Network