G54592 (cdc14b)


Basic Information

Item Value
gene id G54592
gene name cdc14b
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 26546072 ~ 26551536 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU73597
ATGTGATGACTCAGATCCTTTTCAAGGTtagtacataatatatataaatgtgctaAGGAAATAAAAAGCATTGTAAGACATGGACAAACTCTTTGAAATAAAAGGTTATAAACTATTTACAGGTAAAAATTTACAACAGCTCTTTTACACGTATCAAACAGTTGCGTATATACAGCCTTCAGCTGCCAAATACAGGTAAACttgaaaagaaagacaaaaaaaaaagtttcacatttGTTTACACCGTTTAGTCGGCCACAGAGTGGTATATAATAGAAATAGAAAGTTACTGAACGCTTGTTAGGATACATTGAAATCTCTCGCTatgaacactgaaataaaagatTTTACTTCACATAAAATGTTAGCATGTCAAAGCTCCCTTTGTTTCCAAATTAGTACTTCTTTCCTAATGTATCCGTTCTCATCCCATATGGTTCTGTTTTGCAGACACGGGCAGGTTTAGTCCATAAGCAAACTCCTGTAGACTTTATGAAGATGTTACTTTCTGTATCTTGAATCTTCAAAAACAGTTTAGCGGAGTAGAGGTGCTCTAGCTTTAGGGATGGCATGGCTGTTAGCTCTGTTGGATCCAAGTGAGGTTCTGGTTCTTTTCCGAACATCCACATTATCTGAAGGATTTTGAGATTTTGCAGATTTACAGCGTTGTGCACTGGATTGTAGAATAATTctTAAAGAGTTTGATGTAGACCTGGTGTGAATTTTATTCTCCTCTAACGATAAAGACCCTGTGGATGCTCTTGATTGTCTTTTACTCTTCAGTGCCCTCAGTTTGTCACCTTGTGTGAGGCCACTGTgctgctgctcctcctcctcctcatcaacGTCATCATACTGAAGAGAAATTAAAGAACAGAATGTACTGTACATCTTCTGGTGCACTTTGTAAAAG

Function

symbol description
cdc14b Predicted to enable protein serine/threonine phosphatase activity and protein tyrosine phosphatase activity. Acts upstream of or within cilium assembly. Located in condensed chromosome; nucleolus; and spindle. Is expressed in EVL and proliferative region. Orthologous to several human genes including CDC14B (cell division cycle 14B).

NR:

description
PREDICTED: dual specificity protein phosphatase CDC14B isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU73597 True 913 lncRNA 0.37 4 26546072 26551536

Neighbor

gene id symbol gene type direction distance location
fbxl17 fbxl17,LOC107570989 coding downstream 16868 26095111 ~ 26529204 (-)
efna5 efna5,LOC108265807,LOC108430322,LOC106585191,LOC100702629 coding downstream 580007 25780429 ~ 25966065 (-)
lrrc2 lrrc2 coding downstream 924807 25612122 ~ 25621265 (-)
LOC103035302 NA coding downstream 1001545 25541306 ~ 25544527 (-)
LOC103036837 NA coding downstream 1005673 25532060 ~ 25540399 (-)
ubox5 NA coding upstream 42804 26594340 ~ 26599322 (-)
lzts3 lzts3,LOC108265122,LOC107712591 coding upstream 49927 26601463 ~ 26614549 (-)
LOC111192646 NA coding upstream 70121 26621657 ~ 26627863 (-)
LOC103043953 fabp1,LOC103043953,LOC108430333,LOC107704576,LOC107573351,LOC107726869 coding upstream 88965 26640501 ~ 26643368 (-)
LOC103043649 LOC103043649,LOC108430332 coding upstream 97003 26648539 ~ 26653586 (-)
G54580 NA non-coding downstream 225579 26314592 ~ 26320493 (-)
G54574 NA non-coding downstream 368925 26139316 ~ 26177147 (-)
G54572 NA non-coding downstream 522968 26022850 ~ 26023104 (-)
G54524 NA non-coding downstream 551399 25939702 ~ 25994673 (-)
G54498 NA non-coding downstream 791012 25754722 ~ 25755060 (-)
G54613 mrps27 non-coding upstream 120372 26671908 ~ 26676623 (-)
G54623 NA non-coding upstream 149060 26700596 ~ 26701882 (-)
LOC111192648 NA non-coding upstream 175115 26726651 ~ 26734830 (-)
G54651 NA non-coding upstream 197540 26749076 ~ 26749279 (-)
G54656 LOC108430339,LOC108265827,LOC107699644,LOC107560275,LOC107552154,LOC107714550 non-coding upstream 253065 26804601 ~ 26810668 (-)
fam240a LOC108441996 other downstream 983933 25549350 ~ 25562139 (-)
jcad NA other downstream 1547952 24950612 ~ 24998120 (-)
svil NA other downstream 1625482 24786251 ~ 24920590 (-)
G54205 kif5b,kif5bb,LOC108430866,LOC107753262 other downstream 2194136 24341400 ~ 24351936 (-)
G53996 NA other downstream 3454097 23091306 ~ 23091975 (-)
LOC103042298 slc35d2 other upstream 6870 26558406 ~ 26569939 (-)
ccl28 NA other upstream 21864 26573400 ~ 26576425 (-)
LOC103024953 rnf165b,rnf165,LOC108430336,LOC108265796,LOC107726876,LOC107569673,LOC107712483 other upstream 209596 26761132 ~ 26779714 (-)
G54854 dhx37 other upstream 615150 27166686 ~ 27168510 (-)
G54873 NA other upstream 917682 27469218 ~ 27473347 (-)

Expression


Co-expression Network