G55189


Basic Information

Item Value
gene id G55189
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 28575743 ~ 28576127 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU74415
ggccactatgagcaggaggtcgcaggttcgaacccctgctcatgcagctttgccatcaagctgccggcgctcagagggagcaaaattggccctgttccctctgggtgggtagatggcgctctctccccacatcactcctatggtgatgtctgcagcacagggcgtctgtgagctgatgtactggagccgagctgctgtgctttcctccaagtgcgctggctgctcgaaaagaagcggtggctggcttcacatgtatgggaggaagcatgtgttagtcttcaccctcctggtgtgttggggcatccctagtgatagggggagtcctaatgagtgggttgggtaattggccatgtaaattggggagaaaatgggaaaaattagaaaa

Function

GO: NA

KEGG:

id description
ko05322 Systemic lupus erythematosus

RNA

RNA id representative length rna type GC content exon number start site end site
TU74415 True 385 lncRNA 0.55 1 28575743 28576127

Neighbor

gene id symbol gene type direction distance location
LOC103032242 NA coding downstream 28536 28538022 ~ 28547207 (-)
LOC111192658 NA coding downstream 43474 28525106 ~ 28532269 (-)
LOC103033816 NA coding downstream 59108 28507138 ~ 28516635 (-)
LOC103034781 rnf34 coding downstream 83013 28481412 ~ 28492730 (-)
orai1 orai1,LOC108414442,LOC106585507 coding downstream 124279 28445585 ~ 28451464 (-)
hnf1a LOC108412048,LOC107687971 coding upstream 157167 28733294 ~ 28741823 (-)
LOC103028225 NA coding upstream 168226 28744353 ~ 28750831 (-)
hps4 LOC102793116 coding upstream 176104 28752231 ~ 28766471 (-)
LOC103027379 LOC108412053,LOC108264941 coding upstream 190929 28767056 ~ 28769994 (-)
LOC103026611 prkab1,prkab1b,LOC108412051,LOC107554438,LOC107753114,LOC107687987,LOC107703154 coding upstream 218689 28794816 ~ 28803701 (-)
G55156 gpx8 non-coding downstream 69750 28503383 ~ 28505993 (-)
G55180 anapc5,LOC107566004,LOC107703168 non-coding downstream 75364 28499388 ~ 28500379 (-)
G55179 anapc5,LOC107687977,LOC107566004,LOC107703168 non-coding downstream 76665 28498657 ~ 28499078 (-)
G55171 LOC106579932 non-coding downstream 105130 28469512 ~ 28470613 (-)
G55099 NA non-coding downstream 259517 28315953 ~ 28316226 (-)
G55196 NA non-coding upstream 41640 28617767 ~ 28618377 (-)
G55204 NA non-coding upstream 92813 28668940 ~ 28669147 (-)
G55249 NA non-coding upstream 127495 28703622 ~ 28704227 (-)
G55251 NA non-coding upstream 139112 28715239 ~ 28716001 (-)
G55253 NA non-coding upstream 151485 28727612 ~ 28727984 (-)
LOC111192657 NA other downstream 151788 28417733 ~ 28423955 (-)
G55023 cunh5orf51,clg13h5orf51,LOC103038767,LOC107667559,LOC107686395,LOC106585203 other downstream 418294 28153421 ~ 28157449 (-)
LOC103039900 NA other downstream 532492 28026739 ~ 28043251 (-)
G54947 NA other downstream 844664 27728711 ~ 27731079 (-)
G54873 NA other downstream 1102396 27469218 ~ 27473347 (-)
kiaa1671 NA other upstream 1167901 29744028 ~ 29840753 (-)
LOC103046862 LOC108410878 other upstream 1320388 29896515 ~ 29934430 (-)
LOC103027498 LOC108411246,LOC106585447 other upstream 3059354 31635481 ~ 31690808 (-)
LOC103043418 arpc5la,arpc5l,LOC108411248,LOC107571143,LOC108265305,LOC107550963,LOC107753090,LOC107676626 other upstream 3155337 31731464 ~ 31740221 (-)
LOC103021360 LOC108440818,LOC107659619,LOC108265551,LOC107726210,LOC107553829,LOC107684495 other upstream 4195900 32772027 ~ 32802160 (-)

Expression


Co-expression Network