LOC103035822


Basic Information

Item Value
gene id LOC103035822
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 17668664 ~ 17669725 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007241903.2
ATGGAGGCTGCGCTGAGGGGCCACGACGCTGCCTGTGCTAATCAGTCAGCGGCGTCTGCAAATGGGACACAGCCGGCGTCCGTGACCGATGTGACGTACTGCCAGTTTTGGAGTATTGTCTACAATGACGTCGTGCTGCACGTCTCCATAGTATTGATTCTGGTTTTCTTTTCGTTCTCGTTGGTGGTGAACGTCTACCTGCTGTTGGGGCTGGAGCACTCTGAAGCTCTCTCCTGGCAGCCGCGCTACATGCTGCTGAAGAATTTGGTTGTAAGCGACCTTCTGCAGACCTTGACTATGGCTCCGTCTGCACTGTACTGCCTATTTTATTGTCAGATGCTGAGATTTAGTGGATGGTGCTTAGCTCAGCTGTTCATGGCCACACTAGCTATTATCACCTCATTATTGACCGTCTTCTTCATGGCTTTGGAGCGCTACGTCTACATATGCCACGGAATCCATTACTTGTCCATCATGACGAACGTGAGGATGTACATCTGCCTGGTTCTTATCTGGATGCTGGCTCTGTTCGTGGCTACCACTCGTATCATTCTTGTGATGTCAGGACAACCGAGGTTTGGTCAAAACGCCCCTGGATTTGTATGCGAGCCCGGAGTCGTACAGGTGCAGTTGACATTCAAGTTGCGCTTCGAGATCTTCAACAAGGCGACGATGGTCACGTTTCTTCTCCTCGCCGTTTTCGTCTTCTCCTTTTCTTACGGACGAATGTACCAGGAAGCCAGGCAGGCCCTGCAGCcctttcagcaggacaatgcctGCGCTCGGCGCACCGTGGCTTTCTACCTGGGAATCTTTTTCCTGCAGCTGATCCCGAGCTTCTTTAAGTTCGTGACCATGTTCCACGAGGAAGCCGACTTCCACCTGTTTGTAGTTTTACTGGTCTTGGTTCCGCCGTGCATAAATCCTCTGGCCTACGGTTACAGGAACATGGAGGTGCATCAGGCACTGAAGCATCTTTGTGGTTTCAGGGTGAGCGTGAGGCCGTTAGTATCAGTGGGGACTTTATCTGTTTCCGTTCCCTCTCCAGAAGCTGCTGAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007241903.2 True 1062 mRNA 0.52 1 17668664 17669725

Neighbor

gene id symbol gene type direction distance location
LOC103035515 NA coding downstream 3403 17648451 ~ 17665261 (-)
LOC111192622 NA coding downstream 192073 17468051 ~ 17476591 (-)
LOC103037795 mpp7,mpp7a,LOC107657298,LOC107665879 coding downstream 204371 17189815 ~ 17464293 (-)
LOC103024300 mkx,LOC108274364,LOC107665863,LOC107738971,LOC107549415,LOC107584376 coding downstream 740425 16822247 ~ 16928239 (-)
LOC103032046 NA coding downstream 1294323 16363613 ~ 16374341 (-)
grem2 grem2,grem2b,LOC107746751,LOC107570400,LOC107659701 coding upstream 912155 18581880 ~ 18610419 (-)
nat9 nat9 coding upstream 974730 18644455 ~ 18648875 (-)
LOC103024498 ndel1a,LOC108430325,LOC107706877,LOC107698805,LOC107582761,LOC107700135 coding upstream 987107 18656832 ~ 18689601 (-)
LOC103028095 itgb3b,itgb3,LOC108430317,LOC107698806,LOC107706862 coding upstream 1027269 18696994 ~ 18728233 (-)
LOC111192624 LOC108430317 coding upstream 1060318 18730043 ~ 18741304 (-)
G52850 NA non-coding downstream 22956 17593616 ~ 17645708 (-)
G52757 NA non-coding downstream 417041 17187540 ~ 17251623 (-)
G52759 NA non-coding downstream 510759 17157505 ~ 17157905 (-)
G52729 NA non-coding downstream 566198 17102233 ~ 17102466 (-)
G52728 NA non-coding downstream 570195 17098123 ~ 17098469 (-)
G52891 mtr,LOC107674399 non-coding upstream 106157 17775882 ~ 17791944 (-)
G52946 NA non-coding upstream 209082 17878807 ~ 17879433 (-)
G52947 NA non-coding upstream 239763 17909488 ~ 17910071 (-)
G52951 NA non-coding upstream 291821 17961546 ~ 18002313 (-)
G52995 NA non-coding upstream 519742 18189467 ~ 18189667 (-)
G52652 NA other downstream 1078881 16588150 ~ 16589783 (-)
zcchc4 NA other downstream 1241051 16406719 ~ 16427613 (-)
LOC111192725 NA other downstream 1311704 16343756 ~ 16356960 (-)
G52503 polr2a other downstream 1441490 16226236 ~ 16227174 (-)
G52493 NA other downstream 1483352 16182735 ~ 16185312 (-)
G53164 NA other upstream 916676 18586401 ~ 18667287 (-)
LOC103025665 glud1b,LOC108430434,LOC107698813,LOC107700126,LOC107739271,LOC107550058,LOC107749346 other upstream 1852977 19522702 ~ 19570378 (-)
G53382 NA other upstream 2180225 19849950 ~ 19850350 (-)
G53562 LOC107396020,LOC107670363,LOC105896953,LOC102778633 other upstream 2951844 20621569 ~ 20690422 (-)
G53598 msh2,LOC107728724,LOC107673650,LOC107582784,LOC107550043,LOC107749362,LOC107698830 other upstream 3114013 20783738 ~ 20787618 (-)

Expression


Co-expression Network