tmem127 (tmem127,LOC107552193,LOC107713035,LOC106579884,LOC106585551)


Basic Information

Item Value
gene id tmem127
gene name tmem127,LOC107552193,LOC107713035,LOC106579884,LOC106585551
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 27029916 ~ 27034974 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007247200.3
CGTCACGTTACAGGAAGCGGAAGTGTGCGAATGGAAACAGAGTGAGGTAGCTGGGTAGCTAGGCTAGCGGCTGAGCTCGGAGCTGTCTTTGTTTTTATTGGGATTTTGATATAAAGCAGGAGAATGAGGCTGTATTAGACAGAGCAGTCACTCTGAGGGGGAATATTGTGAGTAGGGGCAGCGGGCGGAGGTGAATGGTAAGGGTGGTGTGGGTGTTTTATCGTGTGAGAAGCTCTTTCGGTTCTTTTGTCTGTCTGAGTCTCTCGGTATCCGAGTTAAAATATCCGCTTTGGCCGCGACGAAGCTCGACTTCTCCCCCTCATGGCTTCGCCTGTTTCTCAGTAGGACGGATTTCCACACGCCCGACAGtACATTTCTAAACAACCACTTGATACTTTTGAACCTGGTGCTGTTCAGTTGTTATATCTGAGAAACACATCATGTACGCCCCACCGGGACCTGCTCTCCCCGGAACCCACAGGAGAAGAGGTGGAACAGCACTGCCCAAACAACCCGAACGAAGTTTGGCTTCTGCGCTGCCTGGCGCACTATCCATCACGGCCCTGTGCACAGCCCTGGCCGAGCCAGCCTGGCTGCGGGTGCACGGGGGAACCTGCCCGAGGCAGGAGCTTGGAGTGGCTGACGTTCTGGGATACATAGACGAGACACTTATTAAAGACTATTGCATTAACTCCCAGACCATTCTGCTGTTGCGAGTTATTGCTGCCTTCTGTTTCCTGGGCATTTTATGTAGCCTGACAGCTTTTCTACTGGACGTCTTTGGACCCAAACACCCTGCTCTCAAGATTACACGCCGATATGCCTTTGCTCACATTCTTACAGTGCTCCAGTGTGCCACTGTGATTGGTTTCTGCTACTGGGCCTCAGAGCTCATCCTCTctcttcagcagcagcacaagaaGTATCATGGTTCACTTATCTACGTTACCTTTGCCATCAGCTTCTATCTGGTGGCAGGAGCTGGAGGAGCTTCCATCTTGGCCACGGCTGCCAACCTGCTCCGTCATTACCCCACTGAGGAAGAGGAGCAGGCCCTAGAGCTCCTCTCAGAGATGGAGGAGAGCAGTGAAACTTTCCCTGCTGACTACGATATTGCCAACCAGTTCCAGCCTCCACCTGCTTACACACCCTGATCTGGATTTCAAACCAGCGTGCTTATTCCTTTCCTGTGTATACTCACATCCATGCTTCAGGTACCACTGTCAACCTCCAAACAAACCATGGACTGAGAGACTTGTAGATTCCAGTTGCCAAGTCACGAGTTACATACATAAATTATGTAGGCTGAATACCTAAAATAATACATCATATGCAAACATAATTGTATATCCATGCACAGACTTGAAGTAGCAGTTCGGCTCTTGCTTCAGTGCATGGAACAAATTAACAAGTTTCAGCATCGCTGCTTTTAGGATTGCTGATTAACATGAAAAGTTAATCTTTTCTTATAGTAGTTTGCATGTAAATGGCAGTAAAGGTCCCTTacaaaactgctttaaaaatgacataatGACAGCATTTCATGTGTTTTTGGCATGCAGTATTCTGGCTGCTTCTTGGGCACTTTAAATTGTGGGCTTTGGGAGAACTTTCCATATCCTTtgcatccccccccccccccccccccccccattctgtttattaaatcacaAGTATTTCATCTCCTCCTTACATTCCACCTGTACAATGCCCCACTTCATAGTCTATATTTTGAGGCAGCATTATTCTAAATGCCCTCTTTTAAATTTGAGTATAACACTGTTTATCTAGTCATGTGCAAGCCTGctgttttttctcagtcaggTTGGTCAATTTATTGTGTGGATGACCGACCAATGGAGTGATTTATTTAACTGACATTTTACTGATTTACAAAGAGCCCACAGAATAACACAATTTGAATTcttgattttaaataattgacCCTAACAAAGAGTTTGTAGACCCGTGGAGCTACCTTAAGCTTTTTTGTGCAGTTCTAAAACATCTGCAAATTattctttttaaacttttgtaaagtttttatgaattattttCACTAGCTGTTTAGTTATtgagcttatttaaaaaaaatgcacataaacCCCAGAGAGCACAGactatttattagatttttttatatctattgtTAATTATTCAACCACACATAGTCAGCATTTACTAAGCTCTCTGTGGGATAGCCAGTTTAATCAGTTTTGTCAACTGTAATTTGATACTGTTCAAGTTTGCCAACTGATTGTGAGTGTGCTCTTCATTCATTTGAGGTTTTGATTATATATCTGTTTAtcctgttttgtgtgtttgtgtgtattttgcgTGCTTTGGTAGTGTTATTGAGATTCAGAATGTCCAAACTTGCCACTTGTGTGATACAGTGAAAtcaatacaaattttaaatcaTGGTTGTATTCACACTTTTACAGTCTAATTTAGCATCACCtattaagtcattttttaatATGTGCACTGTCATGGCATGCCCTGACAATTTGATACCGTATTTGTGTTACTTGGTGGACGTTCAAAATCTGATTGTAAACATGTTCTTTTCGGTTTTACAATTTTTCTTTGTCTGCTTTATATTGGGGTGGTTTGTGACCGTTCAATCATATTTAGTttctccttcatttctttagCTGTATCATTAACATGTAAAAAGGATGAATAAAAGATTTGGTGATGGTTTTGTGGTA

Function

symbol description
tmem127 Predicted to be involved in regulation of TOR signaling. Predicted to act upstream of or within negative regulation of TOR signaling and negative regulation of cell population proliferation. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be active in membrane. Human ortholog(s) of this gene implicated in pheochromocytoma. Orthologous to human TMEM127 (transmembrane protein 127).

NR:

description
PREDICTED: transmembrane protein 127

GO:

id name namespace
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K25206 TMEM127; transmembrane protein 127

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007247200.3 True 2714 mRNA 0.43 4 27029916 27034974

Neighbor

gene id symbol gene type direction distance location
LOC103022143 NA coding downstream 1422 27024622 ~ 27028494 (-)
LOC103022658 es1,LOC108430344,LOC105894898,LOC107553036,LOC107671040 coding downstream 6648 27019132 ~ 27023268 (-)
LOC103024013 adra1aa,LOC108430341,LOC107553034,LOC107699645,LOC107671010,LOC107713032,LOC108264882,LOC105894890 coding downstream 109498 26884643 ~ 26920418 (-)
LOC103043649 LOC103043649,LOC108430332 coding downstream 376330 26648539 ~ 26653586 (-)
LOC103043953 fabp1,LOC103043953,LOC108430333,LOC107704576,LOC107573351,LOC107726869 coding downstream 386548 26640501 ~ 26643368 (-)
ufd1 ufd1l coding upstream 6532 27041506 ~ 27049062 (-)
cldn5 cldn5 coding upstream 36904 27071878 ~ 27074018 (-)
srrd NA coding upstream 172334 27207308 ~ 27211033 (-)
LOC103044306 pptc7a,LOC103044306,LOC108430358,LOC107552188,LOC107553043,LOC107699657,LOC107671007,LOC105891618 coding upstream 187866 27222840 ~ 27236161 (-)
LOC103044021 LOC103044021,LOC108430310,LOC103358995,LOC101071916,LOC104927948,LOC103366907 coding upstream 206016 27240990 ~ 27259800 (-)
G54702 NA non-coding downstream 55824 26973568 ~ 26974092 (-)
G54699 tmem230,ct030,LOC103023473,LOC106579885,LOC107713020,LOC101077900,LOC105894893,LOC107553029 non-coding downstream 56923 26962935 ~ 26972993 (-)
G54656 LOC108430339,LOC108265827,LOC107699644,LOC107560275,LOC107552154,LOC107714550 non-coding downstream 219248 26804601 ~ 26810668 (-)
G54651 NA non-coding downstream 280637 26749076 ~ 26749279 (-)
LOC111192648 NA non-coding downstream 295086 26726651 ~ 26734830 (-)
G54716 NA non-coding upstream 23763 27058737 ~ 27060451 (-)
G54846 NA non-coding upstream 112441 27147415 ~ 27505872 (-)
G54869 NA non-coding upstream 208106 27243080 ~ 27245098 (-)
LOC111192649 NA non-coding upstream 376260 27411234 ~ 27412937 (-)
LOC111192650 NA non-coding upstream 627352 27662326 ~ 27663868 (-)
LOC103024953 rnf165b,rnf165,LOC108430336,LOC108265796,LOC107726876,LOC107569673,LOC107712483 other downstream 250202 26761132 ~ 26779714 (-)
ccl28 NA other downstream 453491 26573400 ~ 26576425 (-)
LOC103042298 slc35d2 other downstream 459977 26558406 ~ 26569939 (-)
fam240a LOC108441996 other downstream 1467777 25549350 ~ 25562139 (-)
jcad NA other downstream 2031796 24950612 ~ 24998120 (-)
G54854 dhx37 other upstream 131712 27166686 ~ 27168510 (-)
G54873 NA other upstream 434244 27469218 ~ 27473347 (-)
G54947 NA other upstream 693737 27728711 ~ 27731079 (-)
LOC103039900 NA other upstream 991765 28026739 ~ 28043251 (-)
G55023 cunh5orf51,clg13h5orf51,LOC103038767,LOC107667559,LOC107686395,LOC106585203 other upstream 1118447 28153421 ~ 28157449 (-)

Expression


Co-expression Network