anapc16 (anapc16,cj104)


Basic Information

Item Value
gene id anapc16
gene name anapc16,cj104
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 21933269 ~ 21938448 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007250124.3
GCTGCAACAGTATATGGCTCCGGATAAACTCCACACCGGTAGATGGCGCTAAGTGGGTAAACTCAGCTAATACGAGAAGAAGCACAAACAGCTCGCAACTCATAagGCCCCCCGGGTGTGGACACGGCACCAGGCCAAATGGCCGCttcatcttcctcctcctcagcAGGTGGTGTGAGTGGCAGCTCTGTTACTGGATCTGGCTTTAGTGCATCAGAGCTCATTCCTCCCAGAAAAGTTCTCTACACATATCCCAAAGGAGCGGGAGAGATGATGGAAGatgGCTCAGACAGATTTTTGTGCGAATCAGTGTTCAGTTACCAAGTGGCATCAACTCTTAAGCAGGTGAAGCATGATCAGCAGGTATCTCGAATGGAGAAGCTTGCCAGCCTGGTGGAGGAGCTAGAGGCAGACGAGTGGAAATATAAACCTATTGAACAGTTACTGGGCTTTACAACTTCATAAATtacctgtttgttttttcttcatcaTGTTGTCCTGTATTTATACAGATCCCCCCCcctttttaattcagtgtgagTATGGTAGCTGTGCTTTGCTACATTTGGGCTACATTCTTAAATCACACAGAGGGCTGTGTCAGTATTCTGACCAtgttacatgattttttttttttttttaatgtaaatatacaagaATGTCACTTTACAGATTTCAACAGCTTTACAGTTACCATCTCTTGAATTTTGCCTcccatattttttaatattaatgatgtctataaaaataaatttgtctTAACTTAAA

Function

symbol description
anapc16 Predicted to be involved in protein ubiquitination. Predicted to act upstream of or within cell division. Predicted to be located in chromosome; cytoplasm; and nucleus. Predicted to be part of anaphase-promoting complex. Predicted to be active in cytosol and kinetochore. Orthologous to human ANAPC16 (anaphase promoting complex subunit 16).

NR:

description
CJ104 protein

GO: NA

KEGG:

id description
K25229 APC16, ANAPC16; anaphase-promoting complex subunit 16

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007250124.3 True 768 mRNA 0.42 4 21933269 21938448

Neighbor

gene id symbol gene type direction distance location
ddit4 ddit4 coding downstream 11652 21919529 ~ 21921617 (-)
narf narf,LOC107581643 coding downstream 47828 21873489 ~ 21885441 (-)
LOC103047279 NA coding downstream 62995 21830839 ~ 21870274 (-)
LOC103044518 LOC108430683 coding downstream 263321 21655617 ~ 21669948 (-)
LOC103027095 LOC108274166 coding downstream 548384 20984459 ~ 21384885 (-)
LOC103023380 sar1aa,sar1b,LOC103023380,LOC108429350,LOC107659671,LOC105903360,LOC103362473 coding upstream 108048 22046496 ~ 22054088 (-)
LOC103023701 LOC103023701,LOC108429359,LOC107597744,LOC101481087,LOC106560865 coding upstream 118525 22056973 ~ 22065003 (-)
zeb1 zeb1 coding upstream 2555867 24494315 ~ 24607305 (-)
mtpap NA coding upstream 3133006 25071454 ~ 25099104 (-)
ppic ppic,LOC107704600,LOC107713556,LOC107566397,LOC107726227,LOC100333141 coding upstream 3447242 25385690 ~ 25390707 (-)
G53856 NA non-coding downstream 16510 21907685 ~ 21916759 (-)
G53861 dnajb12 non-coding downstream 35689 21893426 ~ 21897580 (-)
G53858 NA non-coding downstream 44640 21886554 ~ 21888629 (-)
G53851 tdrkh,LOC107702489 non-coding downstream 124813 21798459 ~ 21808456 (-)
G53850 tdrkh non-coding downstream 134832 21792568 ~ 21798437 (-)
G53868 ascc1 non-coding upstream 2154 21940602 ~ 21941350 (-)
G53918 NA non-coding upstream 218541 22156989 ~ 22158000 (-)
G53924 NA non-coding upstream 259800 22198248 ~ 22298487 (-)
G53926 NA non-coding upstream 378946 22317394 ~ 22449619 (-)
G53932 NA non-coding upstream 603722 22542170 ~ 22542524 (-)
G53607 fbxo11,fbxo11b,fbxo11a,LOC107749363,LOC107550041,LOC107728720 other downstream 1113860 20817839 ~ 20819409 (-)
G53598 msh2,LOC107728724,LOC107673650,LOC107582784,LOC107550043,LOC107749362,LOC107698830 other downstream 1145651 20783738 ~ 20787618 (-)
G53562 LOC107396020,LOC107670363,LOC105896953,LOC102778633 other downstream 1242847 20621569 ~ 20690422 (-)
G53382 NA other downstream 2082919 19849950 ~ 19850350 (-)
LOC103025665 glud1b,LOC108430434,LOC107698813,LOC107700126,LOC107739271,LOC107550058,LOC107749346 other downstream 2362891 19522702 ~ 19570378 (-)
G53996 NA other upstream 1152858 23091306 ~ 23091975 (-)
G54205 kif5b,kif5bb,LOC108430866,LOC107753262 other upstream 2402952 24341400 ~ 24351936 (-)
svil NA other upstream 2847803 24786251 ~ 24920590 (-)
jcad NA other upstream 3012164 24950612 ~ 24998120 (-)
fam240a LOC108441996 other upstream 3610902 25549350 ~ 25562139 (-)

Expression


Co-expression Network