fbxl17 (fbxl17,LOC107570989)



Basic Information


Item Value
gene id fbxl17
gene name fbxl17,LOC107570989
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 26095111 ~ 26529204 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>XM_007254053.3
CAGAGATTCCCGGATGTGTTTTCAAACTGTAAAGAGACTGAAGTAGCTAAGCAAGTTGCCTCTGCCTGCAGGCTGGTTTATGGCTCCGGCTCGGCTCTCTGCCTCCCAGCACTAACCTGCTTCTGCCCGGATTATGAGAGCGCGGGACAGGGGCGGGTCACGCCGCGCGGACTGCTGAGTCACCGTGAGTCATCTATATGGGCCATCTTCTCTCGAAAAATGGTTACTGCCTGAAGAAGAAAACTCAGAAGCTgcgcaagaagaagaagaggaggaactGCTTCCTACGGGGCCCCTGCATGCTCTGCTTCATCGTCCGCAGCACCAGTGAAAGTCTTGAGGACGAGTGCCCCTACGAGAGCACCGGTGGTGCGGCTGTGGCTGCCTCCAAGCTTGCTGAACGGTACGTGTCGTTAAGCACGCCCGAGGACTGTGCCAGGTTCCTGCTGTCTCCAGGGGAGTTGGCCGTTGGCTGGGAGGGCCAGGGCCGGAGGAGCTTGCTGTCCGCCGTGCCGGCCAAGCTGATCGGAGCCCCTCCGTTGTTCCGCTGCTCCACTGAATACTCCGAGATGGTCTGCAAGCGCAAGAGTGGCGAGCCACGCCGATGCACGGCTCCCTGCAAGCAGCAGCGTTGTGCTTTTCACGAGGCTGCTCAGGACGAGGAGGCGGCAGAGGAGACGAATACCCCTCCCTCAGCCGGCCAACGCCTGCTGCCCCAACTCTGCCCACTTccatcctcttcctcctcatctGCCTCATCCTCAGAGGAAGAGAGCTCGGGCGTGGGCCTGCAGGCAACAGACTCGGGTGAAAGTCCCAGCAGTAGTGCTGCCACTCCAGAAAGCTCCTCCTTCTCCTGCCCACTTTCTAACAGCGACGGGTCAGAGGATGGCAAGAACTCGGAGAGCACAGATACGTCCCGCATTAACCACCTGCCATCCTCCATACTGCTCAAGATTTTTTCCCATTTGTCAGTGAAGGAACGTTGTCTCTGTGCTTCCCTGGTCTGCAAGTACTGGCGGGACCTCTGCTTAGACTTCCAGTTCTGGAAGCAAATCGATCTCAGTGGTCTCCAACAAGTGAAAGATGACCTCCTGGTGAAGATAGCGTCACGGAGACAGAATGTAACCGAGATCAACATCTCCGACTGTCGGAACGTTCAGGACCATGGCGTGTGCATTCTGGCCTCTAACTGTTCAGGCCTGGTTAAATACACAGCGTACCGCTGTAAGCAGCTCAGTGACCTGTCTCTCTGCACTGTGGCCTCCCACTGCCCGCTACTGCAGAAAGTTCATGTGGGCAACCAGGACAAACTCACTGACAATGCACTTAAAAAGCTGGGTGAACACTGTCCAGAGCTGAAGGATGTCCACTTCGGCCAGTGCTATAACGTCAGCGACGAGGGCTTGATAGCGCTGGCGAAGGGCTGCCCTAAACTGCAGAGAATCTACATGCAGGAGAACAAAATGGTGACGGACAGATCGGTGCGGGCGTTTGCGGAGCACTGTCCGGAGCTGCAGTTCGTGGGCTTCATGGGCTGCTCTGTAACCTCACAGGGGGTCATCCACCTCACCAGACTGCGGAGCCTCAGTAGTTTGGATCTTCGGCACATATCCGAGCTTAACAATGAGACGGTGATGGAGGTGGTGAGAAAGTGCCGGAACCTCAGTTCCCTTAACCTCTGCCTCAATTGGAGCATCAACGACAGatgTGTGGAGATCATCGCCAAGGAGGGAAGAAGTCTGAAAGAGCTGTACTTGGTGTCATGCAAGATAACAGACTATGcactGATAGCTATCGGACAGTACAGCAGCACTATCGAGACAGTGGACGCAGGCTGGTGTAAAGAGATCACAGACCAGGGAGCCACCCAGATTGCCAAGAGCAGCAAGTCTCTGCGCTACCTGGGCCTGATGAGGTGTGATAAGgtGAACGAGgagactgtggagagactggTCCTGCAGTATCCGCACATAGTGTTCAGCACGGTGATGCAAGACTGTAAGCGGACGCTGGAGCGGGCCTATCAGATGGGCTGGAGCCCCAACACCTCCACTGCGTCCTAGCCAACACACatagactcacacacacacacacacacacacacacacacccactcccACCCAGTCACATCTACACAGATGAACTCATGTTTGCCTTCCTTTTTTCAGCACAGCTGGTCAGTTCTGAGAGCGCTAACGTTGATGTGCTAGTGCCATTTCAGCTCCGCTAGTATGTTAGTGTGTTGTTCGCCAGACATCTGTTCTGAGGCAGATGTGAGTGCGAGATACTTCCAGACTTTACGTTTTAGACATCCAGAACATAGTATATAGCTGCatacgtctttttttttttgctagcaGACCTATAGCACACACTCTACTCTGAGACCATCCTTTTATTCCAGCAGTGAGATCCAACTGAGCACCAGAGTATCTGATGAGTAGTTTACTACTTTTTTGAGTTGAGCAGCAGATttgagttgattttttttttttatttagcttttttttttttttttttttcttatttagttTGAGTCTAAACTCTCTGAAATGCAGAAACACTGACTGCATTCACAGCACTGCTCACCTCCTCCTCATTAAACCTGTTGAAACGGACTGTAATCTTCTGCCGCCTTCAGATTTCTAAAAGGTTCGTCGTAGCCTTTCTTATATAAAGGTTTTTAGAAGATTTCAGATAACGGTCAAGGTGACCATTAGGGCTAAATGTTTAGACTTTTTATTAAGAAAGAGaccatataaaacataaaaaaaaaagaagaaaaaaaaaaaaaggcgagGACTCAAATGTGGTTAGTTTGAATATTTTCAGTATTAGAGATGTGTTGAACTCTTATTCTTCGGTATCTGTGTTATTATTGTCCGAGTCGTGCAGAAGAGTTGTGCAACTGCCTTGATGAATGTGGGCTCGACtcgcaaaatatatataatggtaCCTTTCGGTCCCTGTttctttagagtttttttttttttttaggtccagTGAAGTAGGCGACCTCATGAAAAgacaatacaaacaatacaacacTGAATGCAAACTTCACagtaggaaagaaagaaagaaagaaagaaagaaagaatgtcCCTGAATTCTTATATAGTATGTGATATATCCGGGAATATGGAGAaacaggaacaaaaaaaataagaaaaataacat
>XM_022670403.1
CAGAGATTCCCGGATGTGTTTTCAAACTGTAAAGAGACTGAAGTAGCTAAGCAAGTTGCCTCTGCCTGCAGGCTGGTTTATGGCTCCGGCTCGGCTCTCTGCCTCCCAGCACTAACCTGCTTCTGCCCGGATTATGAGAGCGCGGGACAGGGGCGGGTCACGCCGCGCGGACTGCTGAGTCACCGTGAGTCATCTATATGGGCCATCTTCTCTCGAAAAATGGTTACTGCCTGAAGAAGAAAACTCAGAAGCTgcgcaagaagaagaagaggaggaactGCTTCCTACGGGGCCCCTGCATGCTCTGCTTCATCGTCCGCAGCACCAGTGAAAGTCTTGAGGACGAGTGCCCCTACGAGAGCACCGGTGGTGCGGCTGTGGCTGCCTCCAAGCTTGCTGAACGGTACGTGTCGTTAAGCACGCCCGAGGACTGTGCCAGGTTCCTGCTGTCTCCAGGGGAGTTGGCCGTTGGCTGGGAGGGCCAGGGCCGGAGGAGCTTGCTGTCCGCCGTGCCGGCCAAGCTGATCGGAGCCCCTCCGTTGTTCCGCTGCTCCACTGAATACTCCGAGATGGTCTGCAAGCGCAAGAGTGGCGAGCCACGCCGATGCACGGCTCCCTGCAAGCAGCAGCGTTGTGCTTTTCACGAGGCTGCTCAGGACGAGGAGGCGGCAGAGGAGACGAATACCCCTCCCTCAGCCGGCCAACGCCTGCTGCCCCAACTCTGCCCACTTccatcctcttcctcctcatctGCCTCATCCTCAGAGGAAGAGAGCTCGGGCGTGGGCCTGCAGGCAACAGACTCGGGTGAAAGTCCCAGCAGTAGTGCTGCCACTCCAGAAAGCTCCTCCTTCTCCTGCCCACTTTCTAACAGCGACGGGTCAGAGGATGGCAAGAACTCGGAGAGCACAGATACGTCCCGCATTAACCACCTGCCATCCTCCATACTGCTCAAGATTTTTTCCCATTTGTCAGTGAAGGAACGTTGTCTCTGTGCTTCCCTGGTCTGCAAGTACTGGCGGGACCTCTGCTTAGACTTCCAGTTCTGGAAGCAAATCGATCTCAGTGGTCTCCAACAAGTGAAAGATGACCTCCTGGTGAAGATAGCGTCACGGAGACAGAATGTAACCGAGATCAACATCTCCGACTGTCGGAACGTTCAGGACCATGGCGTGTGCATTCTGGCCTCTAACTGTTCAGGCCTGGTTAAATACACAGCGTACCGCTGTAAGCAGCTCAGTGACCTGTCTCTCTGCACTGTGGCCTCCCACTGCCCGCTACTGCAGAAAGTTCATGTGGGCAACCAGGACAAACTCACTGACAATGCACTTAAAAAGCTGGGTGAACACTGTCCAGAGCTGAAGGATGTCCACTTCGGCCAGTGCTATAACGTCAGCGACGAGGGCTTGATAGCGCTGGCGAAGGGCTGCCCTAAACTGCAGAGAATCTACATGCAGGAGAACAAAATGGTGACGGACAGATCGGTGCGGGCGTTTGCGGAGCACTGTCCGGAGCTGCAGTTCGTGGGCTTCATGGGCTGCTCTGTAACCTCACAGGGGGTCATCCACCTCACCAGACTGCGGAGCCTCAGTAGTTTGGATCTTCGGCACATATCCGAGCTTAACAATGAGACGGTGATGGAGGTGGTGAGAAAGTGCCGGAACCTCAGTTCCCTTAACCTCTGCCTCAATTGGAGCATCAACGACAGatgTGTGGAGATCATCGCCAAGGAGGGAAGAAGTCTGAAAGAGCTGTACTTGGTGTCATGCAAGATAACAGACTATGGTTTCAGGTCTAATTTAGCTCCTCTGCTCTGAAATTTGAAGAGTTCCACAGAGTTCTAGCAGCAGCTCCAGTGCAGCGCTGGCAGAAATCCCCATGCCACGCTCCGCACCAACCGCGCAGCAGCCCACGGCAACCCTGAGCATGCTGGGGAATGATGTCTGGGCGGTGTTGGTGGCCAAAGGCGGGGTAAGATGTTCCTCACCAATTAAAGCTGAGCTCAGGCCCACCTGCTCAGGCTGTCAACAGTGCCACAGCCCCCCTGGCTCATCATACGGGCCCGGCGAGGGCCGCTGTGACAGGCTTTAAATTACAGCGGCTCTTTTGGGGAGCACGGGTGGAATTTGGAGAGGGCTCTTCTGAGCAACACTTctgctgtgtctgtgtttttactaactctctctctcactctctctctctagctcaatccttcacacacacacacacacacacacatcatatcCACACTCTCCAAACCACATCAGTTTGGCTTCAGTTCCATTTTTGACGCTTTCTCAGAGCCTCTGGGTAAAGTAGTACGCTTTCTGTTATTAGAAGTTAATAAATGTTTctgtataacagaataatacaGAGTGAATGCATATTAAAGGAGGGGTTTCCGatggtgtgtttgttttgcttttgagttcaagtaaaaataaataaataaaatgttgttctCCAGAATTATGTAAAACACCTAAACTTTATTTGCTAAAATTGCATAATCAATATTTTAGGATACCACAAAGCAGGTATCTGCATCTATGTGAACATaatctggtaacactttacattaagttttaactaactaacatgaatGAATGCTATGCTATTAGTTGCCATTattaagaaaatgaattaatgatATTTTCACATGAACAAACATTTGCAGTAAagcatttgttaagatgaacaataaattataCACTTCATTAATAGTGTTAACTAATGTTGAATAAACAT

Function


symbol description
fbxl17 Orthologous to human FBXL17 (F-box and leucine rich repeat protein 17).

NR:

description
F-box/LRR-repeat protein 17

GO: NA

KEGG:

id description
K10283 FBXL17; F-box and leucine-rich repeat protein 17

RNA


RNA id representative length rna type GC content exon number start site end site
XM_007254053.3 True 3183 mRNA 0.50 10 26095111 26529204
XM_022670403.1 False 2748 mRNA 0.51 9 26188106 26529204

Neighbor


gene id symbol gene type direction distance location
efna5 efna5,LOC108265807,LOC108430322,LOC106585191,LOC100702629 coding downstream 129046 25780429 ~ 25966065 (-)
lrrc2 lrrc2 coding downstream 473846 25612122 ~ 25621265 (-)
LOC103035302 NA coding downstream 550584 25541306 ~ 25544527 (-)
LOC103036837 NA coding downstream 554712 25532060 ~ 25540399 (-)
LOC103035606 LOC108441999 coding downstream 574885 25510629 ~ 25520226 (-)
ubox5 NA coding upstream 65136 26594340 ~ 26599322 (-)
lzts3 lzts3,LOC108265122,LOC107712591 coding upstream 72259 26601463 ~ 26614549 (-)
LOC111192646 NA coding upstream 92453 26621657 ~ 26627863 (-)
LOC103043953 fabp1,LOC103043953,LOC108430333,LOC107704576,LOC107573351,LOC107726869 coding upstream 111297 26640501 ~ 26643368 (-)
LOC103043649 LOC103043649,LOC108430332 coding upstream 119335 26648539 ~ 26653586 (-)
G54572 NA non-coding downstream 72007 26022850 ~ 26023104 (-)
G54524 NA non-coding downstream 100438 25939702 ~ 25994673 (-)
G54498 NA non-coding downstream 340051 25754722 ~ 25755060 (-)
G54490 NA non-coding downstream 366510 25728383 ~ 25728601 (-)
G54486 NA non-coding downstream 400116 25649454 ~ 25694995 (-)
G54592 cdc14b non-coding upstream 16868 26546072 ~ 26551536 (-)
G54613 mrps27 non-coding upstream 142704 26671908 ~ 26676623 (-)
G54623 NA non-coding upstream 171392 26700596 ~ 26701882 (-)
LOC111192648 NA non-coding upstream 197447 26726651 ~ 26734830 (-)
G54651 NA non-coding upstream 219872 26749076 ~ 26749279 (-)
fam240a LOC108441996 other downstream 532972 25549350 ~ 25562139 (-)
jcad NA other downstream 1096991 24950612 ~ 24998120 (-)
svil NA other downstream 1174521 24786251 ~ 24920590 (-)
G54205 kif5b,kif5bb,LOC108430866,LOC107753262 other downstream 1743175 24341400 ~ 24351936 (-)
G53996 NA other downstream 3003136 23091306 ~ 23091975 (-)
LOC103042298 slc35d2 other upstream 29202 26558406 ~ 26569939 (-)
ccl28 NA other upstream 44196 26573400 ~ 26576425 (-)
LOC103024953 rnf165b,rnf165,LOC108430336,LOC108265796,LOC107726876,LOC107569673,LOC107712483 other upstream 231928 26761132 ~ 26779714 (-)
G54854 dhx37 other upstream 637482 27166686 ~ 27168510 (-)
G54873 NA other upstream 940014 27469218 ~ 27473347 (-)

Expression



Co-expression Network