LOC103043649 (LOC103043649,LOC108430332)


Basic Information

Item Value
gene id LOC103043649
gene name LOC103043649,LOC108430332
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 26648539 ~ 26653586 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007254072.3
ttttttgcagtgtacattTCAActttaagtaaatattaaataatatgttCACAAACCGTAGTAGAATTGCAGATCACAGAGGACCATCTGCTTTTTTGGACCTCTCAGACTTCATAGAGAAGAAAACTGCCTACACTTAATTTCAGTACATAAAAACGCCAAAGTGTAAAGGAAGTATGCAAATGTTTGAAGGCTGTTTTTCATTTGACTAAGTGCTCTTCTCTCTCGTTTCTCTGTTCCTCTCTTGTAGCAGAGACGTGATCACGCACGTAAGTAGTGACCTGTGGTGACCTGTAGTGATGCTTAGGCCAAGTGGCTACAGAATAATTGACCTAATCACATGCTATTATTAACTGCAGCAATTAAGGTGGAATTATTAGGCTTAAGTAATAAAGGTGAGGCCGTGGCACTCGCTTCGCTCACCAGATCAGAGTATAAAAACCACATCTTTGATTCAAAATTTCTGAAACATCTTCTGGGTCTTctgctcattcactcattcaacAGGCAGCATCAGAAGCTCAACAAGCACTATGTCCGGGCCCACACTGTACGTTTCCTTGCTGTGCCTTCTCTCAGTCGCCTCAGCCTGCTACATCTCTAACTGCCCAATAGGTGGCAAGAGATCCCTGATAGAGGCTCCAGCTCGTAAGTGTATGCCATGTGGTCCTGGAGACAGGGGCCGCTGCTTTGGCCCCAGTATCTGCTGTGCTGCAGAGCTGGGCTGTTACGTGGGTTCTCCGGAGGCGGCGAGCTGCGTGGAGGAGAACTACCTGCCCAGCCCGTGTGAGAGTGGAGGGAAGGCGTGTGGATCTGAGGGAGGACGCTGTGCTGCCCCGGGAATCTGCTGTCACtcagAGGGTTGCAGTACCGATCAGACATGTTTGGCAGAAGATGAAGCTGAACCAGAGAATAATGAGGGTCTTGGTGGAGAGGTCCTAATGAAGCTCCTGCACCTGGCCAGACAGCACCCCTCCAGCAGAAACCACCAGTAAACCTTTGAGGAGCACTGGACTGGATTAGTGTGATCTTCACATTACTGAAGCACTGGCTCTCACGCAATGTAATGCACTCCCCTTTGACTTGACTTTCTATCAAACGTAGCTAGAATGCATGTTATGTACTGTATAATCGTGAGCACATAACATGTGTTCTGAACTTTAAGGCACTGGCTGCTAGCGTACTCTTGGAATATGGTTCTGTGTTGATAATAAAGTAGAGAAGGGATCATA

Function

NR:

description
oxytocin-neurophysin 1-like

GO:

id name namespace
GO:0005179 hormone activity molecular_function

KEGG:

id description
K05242 AVP; arginine vasopressin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007254072.3 True 1232 mRNA 0.47 4 26648539 26653586

Neighbor

gene id symbol gene type direction distance location
LOC103043953 fabp1,LOC103043953,LOC108430333,LOC107704576,LOC107573351,LOC107726869 coding downstream 5171 26640501 ~ 26643368 (-)
LOC111192646 NA coding downstream 20676 26621657 ~ 26627863 (-)
lzts3 lzts3,LOC108265122,LOC107712591 coding downstream 33990 26601463 ~ 26614549 (-)
ubox5 NA coding downstream 49217 26594340 ~ 26599322 (-)
fbxl17 fbxl17,LOC107570989 coding downstream 119335 26095111 ~ 26529204 (-)
LOC103024013 adra1aa,LOC108430341,LOC107553034,LOC107699645,LOC107671010,LOC107713032,LOC108264882,LOC105894890 coding upstream 231057 26884643 ~ 26920418 (-)
LOC103022658 es1,LOC108430344,LOC105894898,LOC107553036,LOC107671040 coding upstream 365546 27019132 ~ 27023268 (-)
LOC103022143 NA coding upstream 371036 27024622 ~ 27028494 (-)
tmem127 tmem127,LOC107552193,LOC107713035,LOC106579884,LOC106585551 coding upstream 376330 27029916 ~ 27034974 (-)
ufd1 ufd1l coding upstream 387920 27041506 ~ 27049062 (-)
G54592 cdc14b non-coding downstream 97003 26546072 ~ 26551536 (-)
G54580 NA non-coding downstream 328046 26314592 ~ 26320493 (-)
G54574 NA non-coding downstream 471392 26139316 ~ 26177147 (-)
G54572 NA non-coding downstream 625435 26022850 ~ 26023104 (-)
G54524 NA non-coding downstream 653866 25939702 ~ 25994673 (-)
G54613 mrps27 non-coding upstream 18322 26671908 ~ 26676623 (-)
G54623 NA non-coding upstream 47010 26700596 ~ 26701882 (-)
LOC111192648 NA non-coding upstream 73065 26726651 ~ 26734830 (-)
G54651 NA non-coding upstream 95490 26749076 ~ 26749279 (-)
G54656 LOC108430339,LOC108265827,LOC107699644,LOC107560275,LOC107552154,LOC107714550 non-coding upstream 151015 26804601 ~ 26810668 (-)
ccl28 NA other downstream 72114 26573400 ~ 26576425 (-)
LOC103042298 slc35d2 other downstream 78600 26558406 ~ 26569939 (-)
fam240a LOC108441996 other downstream 1086400 25549350 ~ 25562139 (-)
jcad NA other downstream 1650419 24950612 ~ 24998120 (-)
svil NA other downstream 1727949 24786251 ~ 24920590 (-)
LOC103024953 rnf165b,rnf165,LOC108430336,LOC108265796,LOC107726876,LOC107569673,LOC107712483 other upstream 107546 26761132 ~ 26779714 (-)
G54854 dhx37 other upstream 513100 27166686 ~ 27168510 (-)
G54873 NA other upstream 815632 27469218 ~ 27473347 (-)
G54947 NA other upstream 1075125 27728711 ~ 27731079 (-)
LOC103039900 NA other upstream 1373153 28026739 ~ 28043251 (-)

Expression


Co-expression Network