LOC103037795 (mpp7,mpp7a,LOC107657298,LOC107665879)


Basic Information

Item Value
gene id LOC103037795
gene name mpp7,mpp7a,LOC107657298,LOC107665879
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 17189815 ~ 17464293 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022670297.1
agcagcgctgtgGTTGTGGAAGCAGCGTAAGTTCTGCGCAGTGTGAGTGAGCGTGCTGAAATAAACACTggagttttttagtttttaagtgtttttaaagggAATTCGTGGGATTTGGAGGATTTTAGCAGCTGAAACTCGGCCGTGGTGGATTAATTTAGCTAAAGAAGTGGACGGAGAGACTTGAGTTGAGCCGGCGTTTTCCTATTACTATTCACAGTGTGTCCATGGCATAACCTCGGCTTTACAACTTCCTCCTGAGGGAGTGGCCACCCAACCCCACCCATCACGTCATCGCTGGATTGCTGCAGTATCACCGTGGCAGCTGTGTGATATCTACAGGAAGATCTAATCATGCCGGCTCTGTCTGGAACAGGCCCTGAGACAGGTCTGTACGAGTTGCTGTCAGCGTTGCCGGTTCAGCTGCAGGCTCATGTGGACAGCGCAGATGATCGCTCCTTTCTGCACACCATGTTCGGAGAGAGGAGCCTCCACTCACTCGTTAAGgtccaTGAGAAGTTACAGCATTATGAGGAGAGCTGTCCCGCTCCAGTTCTGGACACTGCCGGTGCTCTCGCTCAGGGTgtgttGGAAGAGCTGCAGGGTAAGGTGTTGAGTGTGGAGGTCAGAgagctgctgaagctgctgtccAAACCACACATAAAGagTTTGCTGTCAGTTCATGATACAGTGGCTCAGAAGAGTTACGAGCCTGAGCTTCCTCCTCTGCCAGACGACATCGACGATGATGAAGATTCAGTGAAAATCATCAGACTCGTCAAGAATAAAGAGCCTCTGgGGGCCACCATCAAAAGGGATGAGCGTACGGGTGCCATCTTCATCGCCCGCATCATGAGAGGAGGAGCAGCCGACAGAAGTGGTCTGATCCATGTAGGAGATGAGCTGAAAGAGGTCAATGGCATCCCTGTGGACGACAAGAGACCTGAAGACATAATTCGCATtctgGCTCAGTCTCAGGGTGCAATCACATTTAAAGTGGTGCCAGGAATACTGGATGAAGGCCCAGCCAAAGAACCCAAGGTGTACCTCAGGGCTCTGTTTGACTATAACCCGGAGGAGGACACGGCCATCCCCTGTAAGGAGGCGGGGCTAGCCTTCAGGAGAGGAGATGTGCTGCAGGTGGTGAGTCAGGATGACGCCACCTGGTGGCAGGCCAAACACGAAGGAGGCGCCGACCACCGCGCCGGCCTCATACCATCCAAACACTTCCAGGAGAGGAGACTTGCACATCGTCGACCCCTGACAAACACTCTTCCTCAGAAAATCACCAGAAAACCATCCAGTTTCCGGCGGAGTTTCCGTCTCAGCAAAAGAAATAAGAAGACCAATAAATCCATGTATGAGTGTAAGAAGAGTGAACAGTACGACACGGCTGATCTCCCAACTTACGAAGAAGTTGCTCATTACCGTAAAGGACATGGAGCCAAACATAGACTCGTCGTTCTGGTTGgtccTACAGGAGTGGGTTTGAATGAGCTGAAGAGGAAGTTGTTAATATCTGACCCGCAGCACTTCAGTGTCACCATCCCCCATACGTCTCGAGGGAAGAGGAGTCAGGAGAGTGATGGGGTGGAGTATCACTTCATCTCTAAACACCTGTTTGAGACAGATATTCACAACACTAAGTTTATTGAGCACGGTGAGTATAAGGGGAATTACTACGGGACCAGTGTGGACTCGGTCCGGTCAGTTCTAGCCAAAAACAAGGTGTGCCTTCTGGATGTTCAGCCCCATACGCTGAAGAATCTTCGTACGGCTGAGTTTAAGCCCTTCGTGGTGTTCGTGAAGCCGCCGTCCATCGAGCGTCTGAGAGAGACCAGGAAGAACGCTAAAATAATATCAGGGAAAGATGATAAAGGCTCGGCTAAGCCCTTCACGGAGGAAGACTTCCTGGAGATGATCAATGCAGCCCAACTGATGGAGAACCAGTACGGCCACCTCTTCGAAAAGGTCATCGTTAACGACGACTTAACGACGGCTTTCAGCGAGCTGAAGACGGCCCTGAGGAAGGTGGAGACAGAGACTCACTGGGTTCCTATCAGCTGGACACACTCATGAAGGACAGCACACACACTTGGAAACACATAAGGGAGAGGAatttaacaaaagaaacaaaatgagacaaaagggaaaaacactcgggtaacactttatttgatgGCTACTACATAAAGGCTTcataatacaggggttggaaaatgaaactgaaacacctggttttagagcacaataattgattgtggtgacggacagttct
>XM_022670298.1
agcagcgctgtgGTTGTGGAAGCAGCGTAAGTTCTGCGCAGTGTGAGTGAGCGTGCTGAAATAAACACTggagttttttagtttttaagtgtttttaaagggAATTCGTGGGATTTGGAGGATTTTAGCAGCTGAAACTCGGCCGTGGTGGATTAATTTAGCTAAAGAAGTGGACGGAGAGACTTGAGTTGAGCCGGCGTTTTCCTATTACTATTCACAgtgtgtgtgttttctattTCAGGTGTGTCCATGGCATAACCTCGGCTTTACAACTTCCTCCTGAGGGAGTGGCCACCCAACCCCACCCATCACGTCATCGCTGGATTGCTGCAGTATCACCGTGGCAGCTGTGTGATATCTACAGGAAGATCTAATCATGCCGGCTCTGTCTGGAACAGGCCCTGAGACAGGTCTGTACGAGTTGCTGTCAGCGTTGCCGGTTCAGCTGCAGGCTCATGTGGACAGCGCAGATGATCGCTCCTTTCTGCACACCATGTTCGGAGAGAGGAGCCTCCACTCACTCGTTAAGgtccaTGAGAAGTTACAGCATTATGAGGAGAGCTGTCCCGCTCCAGTTCTGGACACTGCCGGTGCTCTCGCTCAGGGTgtgttGGAAGAGCTGCAGGGTAAGGTGTTGAGTGTGGAGGTCAGAgagctgctgaagctgctgtccAAACCACACATAAAGagTTTGCTGTCAGTTCATGATACAGTGGCTCAGAAGAGTTACGAGCCTGAGCTTCCTCCTCTGCCAGACGACATCGACGATGATGAAGATTCAGTGAAAATCATCAGACTCGTCAAGAATAAAGAGCCTCTGgGGGCCACCATCAAAAGGGATGAGCGTACGGGTGCCATCTTCATCGCCCGCATCATGAGAGGAGGAGCAGCCGACAGAAGTGGTCTGATCCATGTAGGAGATGAGCTGAAAGAGGTCAATGGCATCCCTGTGGACGACAAGAGACCTGAAGACATAATTCGCATtctgGCTCAGTCTCAGGGTGCAATCACATTTAAAGTGGTGCCAGGAATACTGGATGAAGGCCCAGCCAAAGAACCCAAGGTGTACCTCAGGGCTCTGTTTGACTATAACCCGGAGGAGGACACGGCCATCCCCTGTAAGGAGGCGGGGCTAGCCTTCAGGAGAGGAGATGTGCTGCAGGTGGTGAGTCAGGATGACGCCACCTGGTGGCAGGCCAAACACGAAGGAGGCGCCGACCACCGCGCCGGCCTCATACCATCCAAACACTTCCAGGAGAGGAGACTTGCACATCGTCGACCCCTGACAAACACTCTTCCTCAGAAAATCACCAGAAAACCATCCAGTTTCCGGCGGAGTTTCCGTCTCAGCAAAAGAAATAAGAAGACCAATAAATCCATGTATGAGTGTAAGAAGAGTGAACAGTACGACACGGCTGATCTCCCAACTTACGAAGAAGTTGCTCATTACCGTAAAGGACATGGAGCCAAACATAGACTCGTCGTTCTGGTTGgtccTACAGGAGTGGGTTTGAATGAGCTGAAGAGGAAGTTGTTAATATCTGACCCGCAGCACTTCAGTGTCACCATCCCCCATACGTCTCGAGGGAAGAGGAGTCAGGAGAGTGATGGGGTGGAGTATCACTTCATCTCTAAACACCTGTTTGAGACAGATATTCACAACACTAAGTTTATTGAGCACGGTGAGTATAAGGGGAATTACTACGGGACCAGTGTGGACTCGGTCCGGTCAGTTCTAGCCAAAAACAAGGTGTGCCTTCTGGATGTTCAGCCCCATACGCTGAAGAATCTTCGTACGGCTGAGTTTAAGCCCTTCGTGGTGTTCGTGAAGCCGCCGTCCATCGAGCGTCTGAGAGAGACCAGGAAGAACGCTAAAATAATATCAGGGAAAGATGATAAAGGCTCGGCTAAGCCCTTCACGGAGGAAGACTTCCTGGAGATGATCAATGCAGCCCAACTGATGGAGAACCAGTACGGCCACCTCTTCGAAAAGGTCATCGTTAACGACGACTTAACGACGGCTTTCAGCGAGCTGAAGACGGCCCTGAGGAAGGTGGAGACAGAGACTCACTGGGTTCCTATCAGCTGGACACACTCATGAAGGACAGCACACACACTTGGAAACACATAAGGGAGAGGAatttaacaaaagaaacaaaatgagacaaaagggaaaaacactcgggtaacactttatttgatgGCTACTACATAAAGGCTTcataatacaggggttggaaaatgaaactgaaacacctggttttagagcacaataattgattgtggtgacggacagttct

Function

symbol description
mpp7a Predicted to be located in adherens junction; bicellular tight junction; and membrane. Is expressed in several structures, including hatching gland; nervous system; notochord; otic vesicle; and pectoral fin bud. Orthologous to human MPP7 (membrane palmitoylated protein 7).
mpp7 Enables molecular adaptor activity and protein domain specific binding activity. Involved in bicellular tight junction assembly; positive regulation of protein-containing complex assembly; and protein localization to adherens junction. Located in adherens junction; bicellular tight junction; and nucleoplasm. Part of MPP7-DLG1-LIN7 complex.

NR:

description
PREDICTED: MAGUK p55 subfamily member 7 isoform X1

GO:

id name namespace
GO:0005912 adherens junction cellular_component
GO:0005923 bicellular tight junction cellular_component
GO:0016020 membrane cellular_component

KEGG:

id description
K24049 MPP3_7; MAGUK p55 subfamily member 3/7

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022670297.1 False 2278 mRNA 0.50 17 17189815 17464293
XM_022670298.1 True 2300 mRNA 0.50 17 17189815 17464293

Neighbor

gene id symbol gene type direction distance location
LOC103024300 mkx,LOC108274364,LOC107665863,LOC107738971,LOC107549415,LOC107584376 coding downstream 261576 16822247 ~ 16928239 (-)
LOC103032046 NA coding downstream 815474 16363613 ~ 16374341 (-)
shbg NA coding downstream 1030099 16140670 ~ 16159716 (-)
neurl4 neurl4 coding downstream 1060439 16086166 ~ 16129376 (-)
LOC103030780 LOC108430129 coding downstream 1154719 15980633 ~ 16035096 (-)
LOC111192622 NA coding upstream 3758 17468051 ~ 17476591 (-)
LOC103035515 NA coding upstream 184158 17648451 ~ 17665261 (-)
LOC103035822 NA coding upstream 204371 17668664 ~ 17669725 (-)
grem2 grem2,grem2b,LOC107746751,LOC107570400,LOC107659701 coding upstream 1117587 18581880 ~ 18610419 (-)
nat9 nat9 coding upstream 1180162 18644455 ~ 18648875 (-)
G52759 NA non-coding downstream 31910 17157505 ~ 17157905 (-)
G52729 NA non-coding downstream 87349 17102233 ~ 17102466 (-)
G52728 NA non-coding downstream 91346 17098123 ~ 17098469 (-)
G52722 NA non-coding downstream 111861 17030713 ~ 17077954 (-)
G52724 NA non-coding downstream 115715 17070405 ~ 17074100 (-)
G52850 NA non-coding upstream 129323 17593616 ~ 17645708 (-)
G52891 mtr,LOC107674399 non-coding upstream 311589 17775882 ~ 17791944 (-)
G52946 NA non-coding upstream 414514 17878807 ~ 17879433 (-)
G52947 NA non-coding upstream 445195 17909488 ~ 17910071 (-)
G52951 NA non-coding upstream 497253 17961546 ~ 18002313 (-)
G52652 NA other downstream 600032 16588150 ~ 16589783 (-)
zcchc4 NA other downstream 762202 16406719 ~ 16427613 (-)
LOC111192725 NA other downstream 832855 16343756 ~ 16356960 (-)
G52503 polr2a other downstream 962641 16226236 ~ 16227174 (-)
G52493 NA other downstream 1004503 16182735 ~ 16185312 (-)
G53164 NA other upstream 1122108 18586401 ~ 18667287 (-)
LOC103025665 glud1b,LOC108430434,LOC107698813,LOC107700126,LOC107739271,LOC107550058,LOC107749346 other upstream 2058409 19522702 ~ 19570378 (-)
G53382 NA other upstream 2385657 19849950 ~ 19850350 (-)
G53562 LOC107396020,LOC107670363,LOC105896953,LOC102778633 other upstream 3157276 20621569 ~ 20690422 (-)
G53598 msh2,LOC107728724,LOC107673650,LOC107582784,LOC107550043,LOC107749362,LOC107698830 other upstream 3319445 20783738 ~ 20787618 (-)

Expression


Co-expression Network