mtpap


Basic Information

Item Value
gene id mtpap
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 25071454 ~ 25099104 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022670391.1
TCAGCGATGTTTTCGTGCTGGAACCGTGCCTGGATCTCCACATCTGCTGGTTTGAAATGCTCCAAAGGGATCTGCGCAAAGTTGAGAAGCTCCCGTATATTCTCCCGTGTGTGAGAAGTGCGCATGCGTCTTGTACAGTGCAGCAATGGCGGCCTGCTTCAGCGTGTGTAGGGCATATGTGCGGGGAGCGGACAGGCTGCTGAGACTCTGTCCGCGCTGTGAGTTGCAGGCTCAGACCGGGCTCTCCAGGCTCCACAGGACCGACTTTGCGACAGCGGCTCAGGCCGTCAGTAACACTGAGCAGACCGCTGTATCAGATGCTAAGGAATCATTTTCCTTGATCCAAGAGAAAAGACATGATCAAGCTGAGAGGTCTGTCCTGATCAACTGTCCCCCAAATACCAACAAGAAGAAGTTTTTAGCTTATATATCTAAACATGGAGACATCAGGAACCATTTCTTTTATGAGACCTATGGAATCTATGCTGTGGTTGAGTTCTCCAGCAGAGACAGTATCTCATCACTAAAGGAAAACTGTACTATACCAAGTCTGCAGCATGAAGCCTCCGTGCCCTTTAAATCTCGTCTGCTCACGTTAAGTTCGACTGCTACGGGCAAGAAGCAAACTGGACCAAACGCGATAAAGTGCCACAATCTGACACCCCCTTCCTTTGATAAGCTAATAAATCAACTATCCAAACAAGAGACTGTAGATCAGCAGATGCAGTGTCTGACCGAGGCCTGTCAGCTGACTGAAGAAAACATCAGCCTGCGCTTCTTGGTCTGCTCACTGCTCAGAGACATTGCTGCTGCATATTTCCCAGATTGCATTATCAGGCCTTTTGGGTCCACAGTGAACAGCTTTGGGAAGCTGGGCTGTGATCTGGACATGTTTCTGGACCTGGATGCAGTCAGTGGCCACGACCAGAGCAAGGGTTCTGGGTTGTCTCTTGAGTACCAGGTGAAAAGAGGAGCGTCGGAGCGGAACGTCACTCAGAGTATCTTGTCCGTCATCGGTGAATGTGTGGATGTGTTCAGTCCGGGTTGTGTGGGGGTCCAAAAAATTCTCAATGCTCGATGCCCGCTTGTTCGATTCTCACATCAGCCATCAAGCTTTAGGTGTGACCTCACAGCAAACAACAGAGTGGCGATGAAGAGCTCGGAGATGCTGTTTATATACGGCTCGCTGGACGAGCGTTTGCGGTTTCTGGTGTTTACAATACGCTACTGGGCTCGTGCTCACGGCATCACCAACAGCTTTCCAGGAGCATGGATCACCAACTTCTCCCTCACcatgctggtggtgtttttcctccagcaGAGGACTCCAGCCCTGCTGCCCACTCTGAACCAGCTCAGAGACCTGGCAGGCCCATCAGATAAGTGTGTTATTGAGGGGAATGACTGCACGATGGTCACTGACCTAAGCAAGATTACACTTCagcaaaacacagacacactagAAAAGCTCTTGCAGGAGTTCTTTGAGTTTTATGGGAGTTTTGACTTTGGGAAAAGCTCCATCAACATTAGGAAGGGAAGAGAACAGAACAAACCTGAAACATCTGCAATGCACATCCAGAACCCGTTTGAAACAGATCTGAACGTGAGCAGGAATGTTAACAGTAGCCAACTACAGAGGTTTGTGACTCTATGTAAAGAGAGCGCCTGGATTTTCCAGAACGGGGATGTGCTTAAACGAAGGTCTGCCAGCTCATCTAACAAGATCCCACAATGGGGAGTTGCTGCACTTCTAATGCCTTCAGTCACTAAGTCAGTGGAGGCGagggagaagaggaagaggagaaagaatgagaggaCTGCGGAGAGGATAATGTCTGTGCTGCAGTCTTTAAAGAGTCCTGCAGAAGCAGGTGAGGCTTAGAATTTTGACCTTGACTGACAGTCGccaccactagagggcagcgTGCTTCTTGACCATGAATGAGGTCTACTTGAAGCATACTGGGGAACTATCAGCTGTGTATGGGTTACAGACATGGATACACAATATCGTCTTGAGGGGTACAGCTGGGTGAGGCCGCGATACAATCAGGGTGATGAGGGGCATTTGTTTGACCCTTTCCTAAACCAGACATGTTCGTTTTGTCCCTGAGAACACTGTAGCTCCACATCTATTGAACATAAAAACAACCATGTTCACCACTAACACTCTCAACTGGGTTTCAcaggttctggttctgaaggTTACATTTTAGGCATCACTAAACAGGATCTCAGAGAagctgcttttccttttcaaGGTCAAGAACTAAGAGTCTCTCGACTacactctgacccagttccTCTCACAAGACTTGTCTGAAGTGTGTCAGTCAGACAGTGTTATCTTCCAGAGCTATAAATatatagtctctctctctctttggtgACCTTGTGCTCTTTGGAGACCTGGACTTCTAAGATCAGCGTTTCAGAGTTTAAATGTAGATAAGGAGGAACGGCACATCTTCCTGCTGCAtaaataaaggtgttttttaaTGTACGAGATTAAATGTACTGTTTC

Function

NR:

description
poly(A) RNA polymerase, mitochondrial-like

GO: NA

KEGG:

id description
K18060 MTPAP; poly(A) RNA polymerase, mitochondrial

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022670391.1 True 2527 mRNA 0.48 10 25071454 25099104

Neighbor

gene id symbol gene type direction distance location
zeb1 zeb1 coding downstream 464149 24494315 ~ 24607305 (-)
LOC103023701 LOC103023701,LOC108429359,LOC107597744,LOC101481087,LOC106560865 coding downstream 3006451 22056973 ~ 22065003 (-)
LOC103023380 sar1aa,sar1b,LOC103023380,LOC108429350,LOC107659671,LOC105903360,LOC103362473 coding downstream 3017366 22046496 ~ 22054088 (-)
anapc16 anapc16,cj104 coding downstream 3133006 21933269 ~ 21938448 (-)
ddit4 ddit4 coding downstream 3149837 21919529 ~ 21921617 (-)
ppic ppic,LOC107704600,LOC107713556,LOC107566397,LOC107726227,LOC100333141 coding upstream 286586 25385690 ~ 25390707 (-)
cep120 cep120,zgc:163014,LOC107712640 coding upstream 352008 25451112 ~ 25471966 (-)
LOC103046226 znf608 coding upstream 374781 25473885 ~ 25483984 (-)
LOC103037139 LOC108442001,LOC108265961,LOC107697601,LOC107712558,LOC105890695 coding upstream 387458 25486562 ~ 25505546 (-)
LOC103035606 LOC108441999 coding upstream 411525 25510629 ~ 25520226 (-)
G54276 NA non-coding downstream 258827 24810820 ~ 24812627 (-)
G54239 NA non-coding downstream 331399 24739836 ~ 24740055 (-)
G54238 NA non-coding downstream 345110 24725797 ~ 24726344 (-)
G54237 NA non-coding downstream 353267 24717481 ~ 24718187 (-)
LOC111192640 NA non-coding downstream 434079 24616045 ~ 24637375 (-)
LOC111192641 NA non-coding upstream 72 25099176 ~ 25291974 (-)
G54338 NA non-coding upstream 125916 25225020 ~ 25226203 (-)
G54358 snx2 non-coding upstream 234296 25333400 ~ 25346697 (-)
G54360 NA non-coding upstream 242593 25341697 ~ 25343413 (-)
G54448 NA non-coding upstream 425000 25524104 ~ 25525169 (-)
jcad NA other downstream 73334 24950612 ~ 24998120 (-)
svil NA other downstream 150864 24786251 ~ 24920590 (-)
G54205 kif5b,kif5bb,LOC108430866,LOC107753262 other downstream 719518 24341400 ~ 24351936 (-)
G53996 NA other downstream 1979479 23091306 ~ 23091975 (-)
G53607 fbxo11,fbxo11b,fbxo11a,LOC107749363,LOC107550041,LOC107728720 other downstream 4252045 20817839 ~ 20819409 (-)
fam240a LOC108441996 other upstream 450246 25549350 ~ 25562139 (-)
LOC103042298 slc35d2 other upstream 1459302 26558406 ~ 26569939 (-)
ccl28 NA other upstream 1474296 26573400 ~ 26576425 (-)
LOC103024953 rnf165b,rnf165,LOC108430336,LOC108265796,LOC107726876,LOC107569673,LOC107712483 other upstream 1662028 26761132 ~ 26779714 (-)
G54854 dhx37 other upstream 2067582 27166686 ~ 27168510 (-)

Expression


Co-expression Network