LOC103022143


Basic Information

Item Value
gene id LOC103022143
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 27024622 ~ 27028494 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022670409.1
AAGCgtttgacataaaaaaaactaaataattcgagcgaataaatcagattttaaactTAATCCCGAggttaaaacacattaataaccAGCTCTCGGTGTGTCTCACTGTTGCTATAGCAACGCGTGAGGCACAGGGACAAATGCGGCGACCTGATGCCGCTGCCCTGGGAGATAAGCTAGGCTAGCTGTCTAACTAgcaaactgttgttttatttccttttatttcgGAAGAAATGCTCTGTATATATCCGAATATACTTTACTGAGCTTCTCTGGGTAACTGTTGGACCCAGGCAGTAAGAGGTTTAGCTTGTATTGCGGTTGTCGAGGCGTGAACATGTAGCGAGCCAGTGTTTCTTgtcagttagcttagcataagcGACAGACCTTTAACTGTAGCTAACCTAACGTTAGCCTACTaagtgttttattcatttgctttgttaaataataacagtaacgCCATGGACGTAGCTACCGACTGCATAACCAAGAGAAGCAACCTCCCCCCTCTGAGGAATCTACCCAGCTGGACTAGGGTTGGTATACTAGACAGGGCCCGTTACCCGAGGGTAACATTACCTTCTCACAGTGTCCAAAGTGTCCACGAAGGCCCAGTTTCAGTCAGAGAAAGCCCACAGACAAGCCAGAGCAAACCAGGGCTGGATGCATCTCGAGTAGCCTCTCTGGAGAAAGATATTCTGTTCCTTCAGcagacacacaaaaacaccCTGGAGAAACTGCATGAAGAAATTGAAGGTCTGAAACGCACCAACAAAGAGTTACAGTATCGACTGATCATGGATTCACATCAGTCTTCAAGAGAGTCCAGTGCTGAAGTTTTACATGAAAAGCAGCATCAGACTGGTGTCATCAGCTCTGAAGAGAAGCAAGAAACTGCAAATGATCCCGTAGAACAAAATGAAGGAGCCGTCACATCTCTGCTTCCTCTGAAGATCCACAGTGGAAAGTTCAGGCCTCCACGCACCCCAACACTACAGGAGTGTGAAGCTATCATCCAGCAACTCTATAACACTAATGTCTTACAGTCTCAGGAGCTGTTGAAAATGAAGGCTGTTCTCAGAGATGTTGTCttgaacaaaaagaaaatttcaTCTGATGTTTACACTCAAGCAAAGATATACCTCTCTGATCGCACCAGcagtgaagagttGGAGCACTTTCCAAAACTACCTCTTAGACCATTACCAAAAATACAACAGCCCAGTCAGGCCTGTGTGAGACAGAAGGTGATTCTACCGGCCATCAGTCAGAGCCTGCACAGCGGTATGACAGAAAGGCAGAAACGAGCACAGGACATGCACAAAACACGCTTCAGGCGAGCGGTCAACTCTTAGCAGGCTGTTTTTAGTGTTACAGTAAAGATTCTGCAGTATTTCTGGAGAAATCTGACCTCTTATTTTATAATGACTTTACGGTTTCATACTGTTGGTTTAATCTCATGCACTGTGCCATCCATCATCAGAGTTCAATGGTTTCTGATTTTCAGTGTGGACTGAACACTTTCAGTGTGCAATTAAGACTTTGGTGTTAAATAAAGTTCAATGAAATCCCCTCCATTTGGGAATGGATCATTTA
>XM_022670410.1
TGAAAGCgtttgacataaaaaaaactaaataattcgagcgaataaatcagattttaaactTAATCCCGAggttaaaacacattaataaccAGCTCTCGGTGTGTCTCACTGTTGCTATAGCAACGCGTGAGGCACAGGGACAAATGCGGCGACCTGATGCCGCTGCCCTGGGAGATAAGCTAGGCTAGCTGTCTAACTAgcaaactgttgttttatttccttttatttcgGAAGAAATGCTCTGTATATATCCGAATATACTTTACTGAGCTTCTCTGGGTAACTGTTGGACCCAGGCAGTAAGAGGTTTAGCTTGTATTGCGGTTGTCGAGGCGTGAACATGTAGCGAGCCAGTGTTTCTTgtcagttagcttagcataagcGACAGACCTTTAACTGTAGCTAACCTAACGTTAGCCTACTaagtgttttattcatttgctttgttaaataataacagtaacgCCATGGACGTAGCTACCGACTGCATAACCAAGAGAAGCAACCTCCCCCCTCTGAGGAATCTACCCAGCTGGACTAGGGTTGGTATACTAGACAGGGCCCGTTACCCGAGGGTAACATTACCTTCTCACAGTGTCCAAAGTGTCCACGAAGGCCCAGTTTCAGTCAGAGAAAGCCCACAGACAAGCCAGAGCAAACCAGGGCTGGATGCATCTCGAGTAGCCTCTCTGGAGAAAGATATTCTGTTCCTTCAGcagacacacaaaaacaccCTGGAGAAACTGCATGAAGAAATTGAAGGTCTGAAACGCACCAACAAAGAGTTACAGTATCGACTGATCATGGATTCACATCAGTCTTCAAGAGAGTCCAGTGCTGAAGTTTTACATGAAAAGCAGCATCAGACTGGTGTCATCAGCTCTGAAGAGAAGCAAGAAACTGCAAATGATCCCGTAGAACAAAATGAAGGAGCCGTCACATCTCTGCTTCCTCTGAAGATCCACAGTGGAAAGTTCAGGCCTCCACGCACCCCAACACTACAGGAGTGTGAAGCTATCATCCAGCAACTCTATAACACTAATGTCTTACAGTCTCAGGAGCTGTTGAAAATGAAGGCTGTTCTCAGAGATGTTGTCttgaacaaaaagaaaatttcaTCTGATGTTTACACTCAAGCAAAGATATACCTCTCTGATCGCACCAGtgaagagttGGAGCACTTTCCAAAACTACCTCTTAGACCATTACCAAAAATACAACAGCCCAGTCAGGCCTGTGTGAGACAGAAGGTGATTCTACCGGCCATCAGTCAGAGCCTGCACAGCGGTATGACAGAAAGGCAGAAACGAGCACAGGACATGCACAAAACACGCTTCAGGCGAGCGGTCAACTCTTAGCAGGCTGTTTTTAGTGTTACAGTAAAGATTCTGCAGTATTTCTGGAGAAATCTGACCTCTTATTTTATAATGACTTTACGGTTTCATACTGTTGGTTTAATCTCATGCACTGTGCCATCCATCATCAGAGTTCAATGGTTTCTGATTTTCAGTGTGGACTGAACACTTTCAGTGTGCAATTAAGACTTTGGTGTTAAATAAAGTTCAATGAAATCCCCTCCATTTGGGAATGGATCATTTA

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022670409.1 False 1599 mRNA 0.44 8 27024622 27028491
XM_022670410.1 True 1599 mRNA 0.44 8 27024622 27028494

Neighbor

gene id symbol gene type direction distance location
LOC103022658 es1,LOC108430344,LOC105894898,LOC107553036,LOC107671040 coding downstream 1354 27019132 ~ 27023268 (-)
LOC103024013 adra1aa,LOC108430341,LOC107553034,LOC107699645,LOC107671010,LOC107713032,LOC108264882,LOC105894890 coding downstream 104204 26884643 ~ 26920418 (-)
LOC103043649 LOC103043649,LOC108430332 coding downstream 371036 26648539 ~ 26653586 (-)
LOC103043953 fabp1,LOC103043953,LOC108430333,LOC107704576,LOC107573351,LOC107726869 coding downstream 381254 26640501 ~ 26643368 (-)
LOC111192646 NA coding downstream 396759 26621657 ~ 26627863 (-)
tmem127 tmem127,LOC107552193,LOC107713035,LOC106579884,LOC106585551 coding upstream 1422 27029916 ~ 27034974 (-)
ufd1 ufd1l coding upstream 13012 27041506 ~ 27049062 (-)
cldn5 cldn5 coding upstream 43384 27071878 ~ 27074018 (-)
srrd NA coding upstream 178814 27207308 ~ 27211033 (-)
LOC103044306 pptc7a,LOC103044306,LOC108430358,LOC107552188,LOC107553043,LOC107699657,LOC107671007,LOC105891618 coding upstream 194346 27222840 ~ 27236161 (-)
G54702 NA non-coding downstream 50530 26973568 ~ 26974092 (-)
G54699 tmem230,ct030,LOC103023473,LOC106579885,LOC107713020,LOC101077900,LOC105894893,LOC107553029 non-coding downstream 51629 26962935 ~ 26972993 (-)
G54656 LOC108430339,LOC108265827,LOC107699644,LOC107560275,LOC107552154,LOC107714550 non-coding downstream 213954 26804601 ~ 26810668 (-)
G54651 NA non-coding downstream 275343 26749076 ~ 26749279 (-)
LOC111192648 NA non-coding downstream 289792 26726651 ~ 26734830 (-)
G54716 NA non-coding upstream 30243 27058737 ~ 27060451 (-)
G54846 NA non-coding upstream 118921 27147415 ~ 27505872 (-)
G54869 NA non-coding upstream 214586 27243080 ~ 27245098 (-)
LOC111192649 NA non-coding upstream 382740 27411234 ~ 27412937 (-)
LOC111192650 NA non-coding upstream 633832 27662326 ~ 27663868 (-)
LOC103024953 rnf165b,rnf165,LOC108430336,LOC108265796,LOC107726876,LOC107569673,LOC107712483 other downstream 244908 26761132 ~ 26779714 (-)
ccl28 NA other downstream 448197 26573400 ~ 26576425 (-)
LOC103042298 slc35d2 other downstream 454683 26558406 ~ 26569939 (-)
fam240a LOC108441996 other downstream 1462483 25549350 ~ 25562139 (-)
jcad NA other downstream 2026502 24950612 ~ 24998120 (-)
G54854 dhx37 other upstream 138192 27166686 ~ 27168510 (-)
G54873 NA other upstream 440724 27469218 ~ 27473347 (-)
G54947 NA other upstream 700217 27728711 ~ 27731079 (-)
LOC103039900 NA other upstream 998245 28026739 ~ 28043251 (-)
G55023 cunh5orf51,clg13h5orf51,LOC103038767,LOC107667559,LOC107686395,LOC106585203 other upstream 1124927 28153421 ~ 28157449 (-)

Expression


Co-expression Network