cep120 (cep120,zgc:163014,LOC107712640)


Basic Information

Item Value
gene id cep120
gene name cep120,zgc:163014,LOC107712640
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 25451112 ~ 25471966 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022670901.1
GAGCTCCTCTCACAGCGCTGTGGAGCAGTTTGAACAGAACAGCGGCGGTAAACATTAACCTCACAGCCCAGCTGATAGAATAATACACACTTTAACTGCTGATTAAGGTGATAAACCTCGCTGAGTAGAAACTCCGCGGTTTAGGATAATGATATGGCTTCAAAATCCGACCAGCTTCTTATCGTCGTTTCCATTCTTGAAGGTCGTCAGTTCCCCAAAAGTCAGAGACATACTCTGGTTGTTCATGCAAAGTTTGATGGGGAGGAGCTAGCCACAGACCCTGTGGAGCATAAAGAACAGCCACAGTTTAGCACTGAGTTGGCATGGGAGCTAGATCGCAGAACACTTCATCAGCATAGACTCCAGCGGACACCAATCAAGTTACAGTGCTATGCAGTTGATTCAAATACATCTGCAAGGGAATGTGTTGGGTATATTGTTCTGGATCTCAGATCGGTACAGGAGGTTAAACAGcctcCGAAGTGGTATCCTTTGCTTAGCAGCAAATACACCAAACTCAAGCCTGCTTTGTTTTTAAGCATGGTCCTGGAAAATGATAACAAACAGCCACCAGATCAGTTTAAAGCGAAGAAAGCTCCACCCAGACCAGgATCTCCTGTCTTGGCAAATCTAGAATCTGTTAAATTAGAAGCAGTTCTTCATGAAGATGAGGGATACCATCAGATCGGTCCAGCAGATCTTTGCAAGGACATGTTTGTTTTGTCGGTCACTGTTGCCTTTGCCACCAAGCTGGAGCAGTTAATATCCAGTAGGACAAAGCTGGCCAGTGAAGGCTCagagttcttcttcttttactctctccTGGGTAATGATGTCACGAGTGAACCTTTCCAGAATCTCATCAGTCCAAATTTTGAGCCTGAACGAGCCTCAGTTCGTATTCGCAGCAGTGAAAGGCTACTACATGTCTTTCTCAGCCAGCAGAAAAACCTACAGaTCCATCTCTGCTGTGGAGACCAGTCCCTGGGAAGGACTGAGATCTCTATTGCTGCACTGTCGAAGAGAAGCATGGATCTGACTAAGGAGGCAGCCACTATTGAGGGAGCTTTTGTCTTGCAACCCCCAAATCGTACCAAGCAGAGCCTTCAGTCTGTCCCACTGGAGTTACAACCAACAGTTGGGGTGGCAGTTACATTAAGAAGAGAGGGTGTTGGTGTTGAGTTGCCAGGTGCACCTACTGACAGTGGAGATGGACCTAGGACACCAGTAAAGAAAGGCCCCGCAGTGGGTGTCCATGTTGGCCCAACTAATCCTGAGTTAAGACCACGTAGCCCATCCCCCACACACAGATCCCCTGTCCGTAGTCCATCCCCTACCCATAGATCCGGTCCCCATCGGTCTCCATCACCGTCACACTCGGAGAGTGAGGCTGAGAGCCTGCCTGATGACGTAGGGCATGCTCAGCCAAAACAACCAGAATTGCCTCTTACCACACAAGCTGCTGTTGTAGACAAGCCACTGGTAAGTGATACAGCTCAGGAAGTTCAGGAAACCTCCATAACTGTCTCTGCCCCAAAGATTGCCATCCCAGCCTCAGCACACCACTACTGCTTTTCCATGGACCTGCGCAGCATAGGAGATCTGAATGTGGGATTCCCTGTGAACTGCATGCTGAGATATGCCTACCAGTTCTTTGGGAGTGCAGCTCCTATTATGACCAATCCTGCAGTGGAagtaaagaagaacacagaggTGTTCCTACCTCAGTCATACTGTGCCTTTGATTTTGCTGCACTGCCTAATCAACTTCAAGACACCTTCCTGAGAGTCCCCCTAGTAGTAGAGGTGTGGCATCGAGACCCCAGTTCCAGAGACATCTTGCTTGGCACAGCCAGCATCCAACTCTCCCATCTTCTTACCGCTGAGAAGACCCGCTTCATTGGTCAGTCTGGTCAGCAGCATTGGAGGCAGACTTACTCTGAAAGGCTACCGGTTATCAAAGCACAAGGATCAAACGAAAAGATGGCTGAATTGAATTATCTAGCAGTTCTGGAAGACATGGGTCTAGTAAAAGCCCAAGACATCCTCGTATCTGAATCTTCTTtgAGTGGTAATCAAGTGCACCAGAAGACGGCGGTCCCTCCTCGGCATAGTGGGGGCGAGGCGGCAGCCAAGTCTAGGGAGACTCTGGAGTACCAGGCAGCCCTTGAGCTTGAGATGTGGAAGGAGATGCAAGAAGACATATTTGATAACCAGCTGAAGCAGAAAGAACTGAGCCACATGCAGGCCTTGGCAGAGGAGTGGAGGAAGAGAGATCGGGAACGGGAGGCACTTGTTAAGAAGAAGgagATGGAATATAATTTGTTGGAAGAACAGCTCCAGAAGACACTAGCTGATCTGGAGAAGCGGGAGAAGACTCTTGCTCATGCAGAAATAGAGACTCAGAGACTGCAGCGGGAGATGCGTGCAGAGCATGAGTTCAGCATgcgggagctgcaggacagtGGCCGGCGTTTGCGTGAAGACTGTGCTCAccaggtggaactggaaaggtCAAAGGTCAGGCAGCTTGAAGAAGACCTTGCCCGGCAGCAACAGCAGCTTACAGAAGCTGAAAAGAAATACAAGCTGTTGGAAAAAGACTTTCAACAATATCGTGACCAGCAGAACACTCGGCCTGAAATCCGCTTGCAGTCTGAGCTCAACCTGCTTCGGCTGGAGAAGGGGGAGCTGGAGCGGAAATTGGAATCAACAACAAAATCTAAACTTCATTATAAGCAGCAGTGGGGACGTGCCCTGAAAGAGTTGGCAAGATTTAAGCAGcgTTCACTTGGCTATAAGCGCTATGGCTACGTCTTGGTGGAAAAACAAGCGCAGGAGTTGGAGCACATGAGGCTGCGCTACCTGGCAGCCGAGGAGAAGGAAGCTGTCAAGAATGAGAAACACGAGCTACAGGACATCCGCAATGAGCTGAACAGGCTAAAGCagcaggaggagaagaggacGTGGACCGAGCCAGCCGGTGTCTCTCTAAACGAGAGTGCTGATGACCACTTGAGTCGCCTGCTGGAGGAGAGAGATACGCTGCTGCGCACAGGTGTATACACACACGAGGACCGAATCATTGCTGAACTCAACAGGCAGATTAAAGAGGCCATGGCCAACAGACCTCCAAACTAATAGGCTAGTATTTAGGCATTACCACATTCCTCAATATGTTTTATCAAACTACAACAATATTGATACGAAATTTGGCGCATTCCAAAAAAGCCAAATGAAAGTCAAATGAAGTCATATACATCAGTATTTCTCAGTCTTGGTCCTAGAGGCCCACTGCCCTGCACCTTACAGTGTTTTCCCTGTTCCCAACACACCTTATTCAGCTAATCGGCTCATTAACAGCCCATTATTGAGTTAAAGCAGGAAAAGCactaaatacaaaatgtgcAGGGCTGTGGGCTTTCAGGACCAAGGTTAAGaaacatttatatgtatgtacacCTTCTAATTCTATTTGTATATTTTGAAGCCATTTTTAAGCTTTCGAAAAACAATAATGGTACCCAATTTACTGTGATTGTATTGTGAGTTAGTGATTGGGTCATTACACCAGATGGCACTATCTCTCAAGAAATAGttacacaaatattttttttatttttcataaattttTCATTGTTGAAGCTGTATGTCCCTATTTATTGTATGTTGTAACTTGAAAGTATgtgttacttttatatttttgtgtaataaattattttgtaatgcTCTTGTCTAAAAA

Function

symbol description
cep120 Acts upstream of or within cilium assembly.

NR:

description
PREDICTED: centrosomal protein of 120 kDa isoform X2

GO: NA

KEGG:

id description
K16459 CEP120; centrosomal protein CEP120

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022670901.1 True 3742 mRNA 0.47 22 25451112 25471966

Neighbor

gene id symbol gene type direction distance location
ppic ppic,LOC107704600,LOC107713556,LOC107566397,LOC107726227,LOC100333141 coding downstream 60405 25385690 ~ 25390707 (-)
mtpap NA coding downstream 352008 25071454 ~ 25099104 (-)
zeb1 zeb1 coding downstream 843807 24494315 ~ 24607305 (-)
LOC103023701 LOC103023701,LOC108429359,LOC107597744,LOC101481087,LOC106560865 coding downstream 3386109 22056973 ~ 22065003 (-)
LOC103023380 sar1aa,sar1b,LOC103023380,LOC108429350,LOC107659671,LOC105903360,LOC103362473 coding downstream 3397024 22046496 ~ 22054088 (-)
LOC103046226 znf608 coding upstream 1919 25473885 ~ 25483984 (-)
LOC103037139 LOC108442001,LOC108265961,LOC107697601,LOC107712558,LOC105890695 coding upstream 14596 25486562 ~ 25505546 (-)
LOC103035606 LOC108441999 coding upstream 38663 25510629 ~ 25520226 (-)
LOC103036837 NA coding upstream 60094 25532060 ~ 25540399 (-)
LOC103035302 NA coding upstream 69340 25541306 ~ 25544527 (-)
G54358 snx2 non-coding downstream 104415 25333400 ~ 25346697 (-)
G54360 NA non-coding downstream 107699 25341697 ~ 25343413 (-)
LOC111192641 NA non-coding downstream 159138 25099176 ~ 25291974 (-)
G54338 NA non-coding downstream 224909 25225020 ~ 25226203 (-)
G54276 NA non-coding downstream 638485 24810820 ~ 24812627 (-)
G54448 NA non-coding upstream 52138 25524104 ~ 25525169 (-)
trnak-uuu NA non-coding upstream 94308 25566274 ~ 25566346 (-)
trnak-uuu_1 NA non-coding upstream 95175 25567141 ~ 25567213 (-)
trnak-uuu_2 NA non-coding upstream 95427 25567393 ~ 25567465 (-)
trnak-uuu_3 NA non-coding upstream 95679 25567645 ~ 25567717 (-)
jcad NA other downstream 452992 24950612 ~ 24998120 (-)
svil NA other downstream 530522 24786251 ~ 24920590 (-)
G54205 kif5b,kif5bb,LOC108430866,LOC107753262 other downstream 1099176 24341400 ~ 24351936 (-)
G53996 NA other downstream 2359137 23091306 ~ 23091975 (-)
G53607 fbxo11,fbxo11b,fbxo11a,LOC107749363,LOC107550041,LOC107728720 other downstream 4631703 20817839 ~ 20819409 (-)
fam240a LOC108441996 other upstream 77384 25549350 ~ 25562139 (-)
LOC103042298 slc35d2 other upstream 1086440 26558406 ~ 26569939 (-)
ccl28 NA other upstream 1101434 26573400 ~ 26576425 (-)
LOC103024953 rnf165b,rnf165,LOC108430336,LOC108265796,LOC107726876,LOC107569673,LOC107712483 other upstream 1289166 26761132 ~ 26779714 (-)
G54854 dhx37 other upstream 1694720 27166686 ~ 27168510 (-)

Expression


Co-expression Network