trnak-uuu


Basic Information

Item Value
gene id trnak-uuu
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 25566274 ~ 25566346 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnak-uuu
GCCCGgatagctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnak-uuu True 73 tRNA 0.56 1 25566274 25566346

Neighbor

gene id symbol gene type direction distance location
LOC103035302 NA coding downstream 21747 25541306 ~ 25544527 (-)
LOC103036837 NA coding downstream 25875 25532060 ~ 25540399 (-)
LOC103035606 LOC108441999 coding downstream 46048 25510629 ~ 25520226 (-)
LOC103037139 LOC108442001,LOC108265961,LOC107697601,LOC107712558,LOC105890695 coding downstream 60728 25486562 ~ 25505546 (-)
LOC103046226 znf608 coding downstream 82290 25473885 ~ 25483984 (-)
lrrc2 lrrc2 coding upstream 45776 25612122 ~ 25621265 (-)
efna5 efna5,LOC108265807,LOC108430322,LOC106585191,LOC100702629 coding upstream 214083 25780429 ~ 25966065 (-)
fbxl17 fbxl17,LOC107570989 coding upstream 528765 26095111 ~ 26529204 (-)
ubox5 NA coding upstream 1027994 26594340 ~ 26599322 (-)
lzts3 lzts3,LOC108265122,LOC107712591 coding upstream 1035117 26601463 ~ 26614549 (-)
G54448 NA non-coding downstream 41105 25524104 ~ 25525169 (-)
G54358 snx2 non-coding downstream 219577 25333400 ~ 25346697 (-)
G54360 NA non-coding downstream 222861 25341697 ~ 25343413 (-)
LOC111192641 NA non-coding downstream 274300 25099176 ~ 25291974 (-)
G54338 NA non-coding downstream 340071 25225020 ~ 25226203 (-)
trnak-uuu_1 NA non-coding upstream 795 25567141 ~ 25567213 (-)
trnak-uuu_2 NA non-coding upstream 1047 25567393 ~ 25567465 (-)
trnak-uuu_3 NA non-coding upstream 1299 25567645 ~ 25567717 (-)
trnak-uuu_4 NA non-coding upstream 1551 25567897 ~ 25567969 (-)
trnak-uuu_5 NA non-coding upstream 1803 25568149 ~ 25568221 (-)
fam240a LOC108441996 other downstream 4135 25549350 ~ 25562139 (-)
jcad NA other downstream 568154 24950612 ~ 24998120 (-)
svil NA other downstream 645684 24786251 ~ 24920590 (-)
G54205 kif5b,kif5bb,LOC108430866,LOC107753262 other downstream 1214338 24341400 ~ 24351936 (-)
G53996 NA other downstream 2474299 23091306 ~ 23091975 (-)
LOC103042298 slc35d2 other upstream 992060 26558406 ~ 26569939 (-)
ccl28 NA other upstream 1007054 26573400 ~ 26576425 (-)
LOC103024953 rnf165b,rnf165,LOC108430336,LOC108265796,LOC107726876,LOC107569673,LOC107712483 other upstream 1194786 26761132 ~ 26779714 (-)
G54854 dhx37 other upstream 1600340 27166686 ~ 27168510 (-)
G54873 NA other upstream 1902872 27469218 ~ 27473347 (-)

Expression


Co-expression Network