trnak-uuu_36


Basic Information

Item Value
gene id trnak-uuu_36
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 25594259 ~ 25594331 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnak-uuu_36
gcccggatggctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnak-uuu_36 True 73 tRNA 0.58 1 25594259 25594331

Neighbor

gene id symbol gene type direction distance location
LOC103035302 NA coding downstream 49732 25541306 ~ 25544527 (-)
LOC103036837 NA coding downstream 53860 25532060 ~ 25540399 (-)
LOC103035606 LOC108441999 coding downstream 74033 25510629 ~ 25520226 (-)
LOC103037139 LOC108442001,LOC108265961,LOC107697601,LOC107712558,LOC105890695 coding downstream 88713 25486562 ~ 25505546 (-)
LOC103046226 znf608 coding downstream 110275 25473885 ~ 25483984 (-)
lrrc2 lrrc2 coding upstream 17791 25612122 ~ 25621265 (-)
efna5 efna5,LOC108265807,LOC108430322,LOC106585191,LOC100702629 coding upstream 186098 25780429 ~ 25966065 (-)
fbxl17 fbxl17,LOC107570989 coding upstream 500780 26095111 ~ 26529204 (-)
ubox5 NA coding upstream 1000009 26594340 ~ 26599322 (-)
lzts3 lzts3,LOC108265122,LOC107712591 coding upstream 1007132 26601463 ~ 26614549 (-)
trnak-uuu_35 NA non-coding downstream 1342 25592845 ~ 25592917 (-)
trnak-uuu_34 NA non-coding downstream 2754 25591433 ~ 25591505 (-)
trnak-uuu_33 NA non-coding downstream 3006 25591181 ~ 25591253 (-)
trnak-uuu_32 NA non-coding downstream 4997 25589190 ~ 25589262 (-)
trnak-uuu_31 NA non-coding downstream 5249 25588938 ~ 25589010 (-)
trnak-uuu_37 NA non-coding upstream 761 25595092 ~ 25595164 (-)
trnak-uuu_38 NA non-coding upstream 1594 25595925 ~ 25595997 (-)
G54466 LOC103035659,LOC108430319 non-coding upstream 8086 25602417 ~ 25605207 (-)
G54471 LOC103036292 non-coding upstream 35464 25629795 ~ 25633221 (-)
G54486 NA non-coding upstream 55123 25649454 ~ 25694995 (-)
fam240a LOC108441996 other downstream 32120 25549350 ~ 25562139 (-)
jcad NA other downstream 596139 24950612 ~ 24998120 (-)
svil NA other downstream 673669 24786251 ~ 24920590 (-)
G54205 kif5b,kif5bb,LOC108430866,LOC107753262 other downstream 1242323 24341400 ~ 24351936 (-)
G53996 NA other downstream 2502284 23091306 ~ 23091975 (-)
LOC103042298 slc35d2 other upstream 964075 26558406 ~ 26569939 (-)
ccl28 NA other upstream 979069 26573400 ~ 26576425 (-)
LOC103024953 rnf165b,rnf165,LOC108430336,LOC108265796,LOC107726876,LOC107569673,LOC107712483 other upstream 1166801 26761132 ~ 26779714 (-)
G54854 dhx37 other upstream 1572355 27166686 ~ 27168510 (-)
G54873 NA other upstream 1874887 27469218 ~ 27473347 (-)

Expression


Co-expression Network