trnak-uuu_38


Basic Information

Item Value
gene id trnak-uuu_38
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 25595925 ~ 25595997 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnak-uuu_38
gcccggatggctcagtcggtagagcatcagacttttaatctgagggtccagggttcaagtccctgttcgggcg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnak-uuu_38 True 73 tRNA 0.58 1 25595925 25595997

Neighbor

gene id symbol gene type direction distance location
LOC103035302 NA coding downstream 51398 25541306 ~ 25544527 (-)
LOC103036837 NA coding downstream 55526 25532060 ~ 25540399 (-)
LOC103035606 LOC108441999 coding downstream 75699 25510629 ~ 25520226 (-)
LOC103037139 LOC108442001,LOC108265961,LOC107697601,LOC107712558,LOC105890695 coding downstream 90379 25486562 ~ 25505546 (-)
LOC103046226 znf608 coding downstream 111941 25473885 ~ 25483984 (-)
lrrc2 lrrc2 coding upstream 16125 25612122 ~ 25621265 (-)
efna5 efna5,LOC108265807,LOC108430322,LOC106585191,LOC100702629 coding upstream 184432 25780429 ~ 25966065 (-)
fbxl17 fbxl17,LOC107570989 coding upstream 499114 26095111 ~ 26529204 (-)
ubox5 NA coding upstream 998343 26594340 ~ 26599322 (-)
lzts3 lzts3,LOC108265122,LOC107712591 coding upstream 1005466 26601463 ~ 26614549 (-)
trnak-uuu_37 NA non-coding downstream 761 25595092 ~ 25595164 (-)
trnak-uuu_36 NA non-coding downstream 1594 25594259 ~ 25594331 (-)
trnak-uuu_35 NA non-coding downstream 3008 25592845 ~ 25592917 (-)
trnak-uuu_34 NA non-coding downstream 4420 25591433 ~ 25591505 (-)
trnak-uuu_33 NA non-coding downstream 4672 25591181 ~ 25591253 (-)
G54466 LOC103035659,LOC108430319 non-coding upstream 6420 25602417 ~ 25605207 (-)
G54471 LOC103036292 non-coding upstream 33798 25629795 ~ 25633221 (-)
G54486 NA non-coding upstream 53457 25649454 ~ 25694995 (-)
G54490 NA non-coding upstream 132386 25728383 ~ 25728601 (-)
G54498 NA non-coding upstream 158725 25754722 ~ 25755060 (-)
fam240a LOC108441996 other downstream 33786 25549350 ~ 25562139 (-)
jcad NA other downstream 597805 24950612 ~ 24998120 (-)
svil NA other downstream 675335 24786251 ~ 24920590 (-)
G54205 kif5b,kif5bb,LOC108430866,LOC107753262 other downstream 1243989 24341400 ~ 24351936 (-)
G53996 NA other downstream 2503950 23091306 ~ 23091975 (-)
LOC103042298 slc35d2 other upstream 962409 26558406 ~ 26569939 (-)
ccl28 NA other upstream 977403 26573400 ~ 26576425 (-)
LOC103024953 rnf165b,rnf165,LOC108430336,LOC108265796,LOC107726876,LOC107569673,LOC107712483 other upstream 1165135 26761132 ~ 26779714 (-)
G54854 dhx37 other upstream 1570689 27166686 ~ 27168510 (-)
G54873 NA other upstream 1873221 27469218 ~ 27473347 (-)

Expression


Co-expression Network