CI01000016_00448107_00452861 (CCNE2)


Basic Information

Item Value
gene id CI01000016_00448107_00452861
gene name CCNE2
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 447858 ~ 452861 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000016_00448107_00452861.mRNA
ATGCGCAGTAGCCGCGAACCGCTGGACTATATATTGCTTGGCGCCATTCATTCATTCACTCGCACTGAACACTGCGGAGAAAAGCACACCGTTTGTTTAGAAAATGTCAAGACGCAGAACCGTTGTTTTGAAGGGGATATTAGTCCCATTGTCTTAATCGAGACCCCTCAGAAGGAGGCTAATCAGGAGACTGGTAATCTTTCTGGTTTTAAACGCTTCAGATTCAAGAACCTCTTTGTGAAGCCCTCTCCACTGCCATGCCTCAGTTGGGCCAGTTCAGATGACGTGTGGATAAAGATGCTGAACAAGGAGCTGAAGTATGTACATGACAAGGGCTTCATCCAGCAACATCCAGCACTGCAGCCTAAAATGAGGTCTATTCTGCTGGACTGGCTCATGGAGGTCAGCGAAGTTTATACACTCCACAGAGAGACGTTTTACTTGGCTCAGGACATCTTTGATCGCTTCATGCTTACTCAGAAGGACACTGGCAAAGATCAACTGCAGCTCATCGGCATAACCTCACTCTTCATAGCCTCAAAGATAGAGGAGATTTACCCGCCAAAGCTCCAGGAGTTTGCTTATGTGACGGACGGGGCCTGTAATGAGGAGGAGATTCTTGCTAAAGAGCTTGTCATGTTGAAGGCGTTAAACTGGGACCTCTGTCCCGAGACAGTCATCTCATGGTTGAAGCTCTACTCTCAAGTGGACTCTTTGAAGGATGATGCCAGTTTCCTCATTCCTCAGTTCTCACAGGAAACCTACATTCAAATCACACAGTTGTTGGATCTTTGCATTTTGGACATTAATTCTTTGGATTACCAGTATGGAGTCCTCGCTGCTGCTGCATTTTGTCACTTTACCTCTTTTGAAACGGTCCATAAAGTATCAGGGCTCACATGGGACAGCATATCAAGTTGTGTGCGGTGGATGAACCCATTTGTGCGGACTGTACGCGAATGGACCAGACCACAGCTAAAGGACTTCAAAAAGGTTGCGGCAGAAGATCGACACAACATACAGACCCACGTGGACTACCTGGCCATGTTGAGTGAAGCACATGATCGGCAGCAGGACAGCTTGGACCGGATGTCTCCGTTGGCTGTAGCGGGAATATTGACCCCTCCTAAAAGCACTGAGAAACCTGCAAATGTCTGACGGGTTTGAGGAGTACATGGCGTAGCTAGTCTTCATTATTTGCCATCACAGCCCAGAGATGTGAGACCTTCCAGACCAACACATCCAGAGACATATAGTTGTGTGTGGTACTTTTTGGGTGGTCTATAGGAAACAAATCCAGGCGTACTTCAAATGTTGTTGTGTGAAATTGAGGGAGAACCTAAATTTGGTTTCCCAAAGCAGTATTTGAAGCACTCAGAAGTGCCTTCCATCGAAGAATGGATTAAA

Function

symbol description
ccne2 Predicted to enable cyclin-dependent protein serine/threonine kinase regulator activity. Predicted to be involved in G1/S transition of mitotic cell cycle and regulation of cyclin-dependent protein serine/threonine kinase activity. Predicted to act upstream of or within regulation of cell cycle. Predicted to be part of cyclin E1-CDK2 complex and cyclin E2-CDK2 complex. Predicted to be active in centrosome; cytoplasm; and nucleus. Is expressed in brain; digestive system; head; and proliferative region. Human ortholog(s) of this gene implicated in castration-resistant prostate carcinoma. Orthologous to human CCNE2 (cyclin E2).

NR:

description
Ccne2 protein, partial

GO:

id name namespace
GO:0005634 nucleus cellular_component

KEGG:

id description
K06626 CCNE; G1/S-specific cyclin-E1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000016_00448107_00452861.mRNA True 1407 mRNA 0.47 9 447858 452861

Neighbor

gene id symbol gene type direction distance location
CI01000016_00251025_00251471 GBP coding downstream 196372 250218 ~ 251486 (-)
CI01000016_00166492_00172759 SERINC2L coding downstream 275099 166085 ~ 172759 (-)
CI01000016_00153934_00154312 NA coding downstream 292236 153908 ~ 155622 (-)
CI01000016_00099623_00100245 NA coding downstream 347613 98834 ~ 100245 (-)
CI01000016_00079894_00094596 HIVEP3 coding downstream 353262 78944 ~ 94596 (-)
CI01000016_00456765_00460615 TP53INP1 coding upstream 1967 454828 ~ 461209 (-)
CI01000016_00471859_00490955 NAGPA coding upstream 17922 470783 ~ 490955 (-)
CI01000016_00513504_00514565 NA coding upstream 59263 512124 ~ 514744 (-)
CI01000016_00581946_00586945 NA coding upstream 129005 581866 ~ 586997 (-)
CI01000016_00589778_00591095 METTL6 coding upstream 136811 589672 ~ 591294 (-)
G93934 NA non-coding downstream 46086 400493 ~ 401772 (-)
G93873 NA non-coding downstream 166647 280994 ~ 281211 (-)
G93835 NA non-coding downstream 244912 199158 ~ 202946 (-)
G93829 NA non-coding downstream 258520 188604 ~ 189338 (-)
G93801 NA non-coding downstream 296893 62817 ~ 150965 (-)
G93954 NA non-coding upstream 56210 509071 ~ 509303 (-)
G93988 NA non-coding upstream 121439 574300 ~ 576181 (-)
G93992 NA non-coding upstream 126356 579217 ~ 579783 (-)
G94011 NA non-coding upstream 183306 636167 ~ 636370 (-)
G94017 NA non-coding upstream 191812 644673 ~ 644880 (-)
G94786 NA other upstream 1817975 2270836 ~ 2276275 (-)
G95070 NA other upstream 2532399 2985260 ~ 2985641 (-)
CI01000016_03647744_03675574 NA other upstream 3182746 3647653 ~ 3675585 (-)
CI01000016_03921124_03930996 NA other upstream 3412900 3920055 ~ 3931162 (-)
CI01000016_04921091_04922518 NA other upstream 4459847 4918975 ~ 4922518 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location