G93567


Basic Information

Item Value
gene id G93567
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000016
NCBI id null
chromosome length 12175457
location 1461600 ~ 1461978 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU106455
AAACGACTAGCCAATGCATTTCTAGAAACAGGGCAAGACAGAAGAAATGATCCTTGGATATCAATGCAAGAAACAGATAATTGACCAGTGAAGACCTACCAAAACATTCAGATGGTTAGTCAAAAATGCAGTCCTTTATTTTGTTAAGAAAGAAACAGATTCTTAGCTGATCTTCCAGCTTGGCGATGAAAAACGACCAGCCAAAACATTCCTGGAAAACAAGGCGAGAAGAAGAAATGATCTTTGGATATCAATGCACGAAAGGGATAATTGATCAATGAAGACCGACCAAAATATTCCTATGGTTAGTCAAAAAAAAAAAAAAAAAATGCAGTCCTTTATTTTGCTAAGAAAGGAACAGATTCTTAGCTGATCTTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU106455 True 379 lncRNA 0.36 1 1461600 1461978

Neighbor

gene id symbol gene type direction distance location
CI01000016_01408124_01408966 TMEM74 coding upstream 52435 1406636 ~ 1409165 (+)
CI01000016_01277792_01304615 NA coding upstream 156838 1276928 ~ 1304762 (+)
CI01000016_01253760_01273553 NA coding upstream 187647 1253406 ~ 1273953 (+)
CI01000016_01238151_01242924 GDF6, GDF6A coding upstream 218640 1237991 ~ 1242960 (+)
CI01000016_01217119_01220858 EBAG9 coding upstream 239663 1217119 ~ 1221937 (+)
CI01000016_01476236_01476607 NA coding downstream 14258 1476236 ~ 1476762 (+)
CI01000016_01509959_01560806 EIF3E.L, EIF3EB, EIF3E, EIF3E.S, EIF3EA coding downstream 47981 1509959 ~ 1561122 (+)
CI01000016_01563821_01567070 NA coding downstream 100420 1562398 ~ 1567529 (+)
CI01000016_01588035_01601276 RSPO2 coding downstream 125092 1587070 ~ 1601909 (+)
CI01000016_01656995_01657299 NA coding downstream 195017 1656995 ~ 1658390 (+)
G93547 NA non-coding upstream 12006 1394698 ~ 1449594 (+)
G93598 NA non-coding upstream 12163 1421620 ~ 1449437 (+)
G93483 NA non-coding upstream 118802 1340452 ~ 1342798 (+)
G93497 NA non-coding upstream 199393 1261920 ~ 1262207 (+)
G93449 NA non-coding upstream 225754 1228198 ~ 1235846 (+)
G93565 NA non-coding downstream 139 1462117 ~ 1469355 (+)
G93624 NA non-coding downstream 34415 1496393 ~ 1554026 (+)
G93711 NA non-coding downstream 451819 1913797 ~ 1942317 (+)
G93780 NA non-coding downstream 506560 1968538 ~ 1978432 (+)
G93777 NA non-coding downstream 577611 2039589 ~ 2045283 (+)
G93406 NA other upstream 534068 905400 ~ 927532 (+)
G95439 NA other downstream 2400197 3862175 ~ 3862305 (+)
G95648 NA other downstream 2810658 4272636 ~ 4273905 (+)
CI01000016_04829592_04837305 NA other downstream 3372580 4829592 ~ 4837457 (+)
G95792 NA other downstream 3757902 5219880 ~ 5225941 (+)
CI01000016_05405791_05407797 AICDA other downstream 3943891 5405791 ~ 5407963 (+)

Expression


Co-expression Network