CI01000021_06423446_06426296


Basic Information

Item Value
gene id CI01000021_06423446_06426296
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 6423446 ~ 6427608 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_06423446_06426296.mRNA
GGATGAAGCGTTGGTGAAATATGCCATGCTAGCAGAAACTGGTCTCAGTGTGGCACAGCACAATGCCGCCCATCTGTGTGAGGTGTTAAGCCACAGTTCTGCCTGTCAGTGGAGGTTTCACAACTACTCCACCTACAATCACATCCCTCATGAAGCTGGTTTGTTGCGAATGGGAGATTATTACTGTAAACTGGCTGATATGGTGAAGGCCATGTACATGTACAGTACAGCAGCAGTGCATGGCAGTCCTCAGGGACTCTTTAATCTGGCCATGTTAATTGAAGAAGGTTATGAAGTTCCAGACATAATTCTAGATCAGATGGCAATCTCAGCCTCACACAATGGGAACCGGAGCGTTGTTGTGGGAAATCTATTATCCAGATGCAGGGAGTTTGAGGAGGGGGACGTGACTCCCTGTTCTTTAGTCCTGTGGAGGATCCAGTTAATCCAAGCATGGAGAGACTTCACACACAGCTCTGTTCAGCTGACGCTGGCCTGTGGGATTGCCGCCATATTCAGCGTTTTTGTAATTGCTGTGCTATTACGAACTCTTCTAGGACATTACCGGAACAAATGGTGCTTTCCCCCACATAGGCTGCAGCTCTTTGATTCTGGACAGCATGTAGCTACATGTCCGATGATCCATGGAACTGGCACTGTTGGCCTGCACTGTTCGCCTTCACGTGGCCTTGAGCGCCGCACCTCCTGCAATACACTGGCTGCCCAGGATAATGAAGAAATCCTCTGTTTGACCCGATGAACAAGGATCCTGGTGTGTGCACTAGGCCTCCCGGCGACACTGGGTCTAATAAGTTTCACCAGGTACCTCAGTTTGCCCGTCGAGATGCCAAAGCTGTCTTTTAAGCACTTGCCCCCTTTCACTGTTGCAGTATCTAGCCAGGAATGTACACAAATTTCTATATTCCACTAAAGGGTTGTAGAGGTGGATTATCAAAGGTAAAAAGTCTTGAGCAAAGGCTGGAAAGAGCTAAGGAAAGGGCCTTTCAAACACTGATGGTCTTTCTTCTTCTCCCAAGCTTCAAAAAATGCAACACAATCCCTTAAAAGTTAAGTCCATAAATCCAGAAGTTGAAAAATCTTGCAGACAAAAAAACTAAAGCAGAAATTCCAAAAACTTCCCTTAAGACACCACAAAGTCTCATCCAATTCTTCTCTTAACTTTCATATCTGCTTTTACTTCACTTTCACAGACTGCTTTTTTATCTAATATTACAATCAACTAATTTGTTCAGCGAACACTCAGTATTGATTATTTATTAATTCTAAAAAAAAAAATTTTAATTTCCAGGATAAGGGAAATAACTTTCTTACTGTGCAGTACTGTGATCGCAATCGTTAAATTAACATTGCTGAGAATCAGAAACAAATATGTATTGTGCACAAGTTTTATTAACTAAATCACGAACACAACTATTCTAAACAAACACATACACACAATCACACATACATTGATAAAATGGAAAGTGACAGAATGAAAACGGAAATGGAAACAGGGAATGAAGCTATGGAAAGAGTCATTTAACCATGAAAAGAACCATCAGCTGCTTATTTCAAAACACCTCATTAAATATACAATACTTGAATTTGCCTTTGCAGTTGAAGCGGTCTGTGAAGTTTCTGAAGAAGAAGGTTTTGATGGTTCCTTGAGTCTATGCCGTTGAATTTGCAATTTCTTCTGCGTTGAATGAAGAAATGATGACAAACTTGCATGGCTAGTTTGACTCTGTTGTGGCTTTTCTCTTGAGTAAGCACATGGCTGGTTGTAGATTGAGGCCTGCCGATGCAGAACGGCAAACAGAGGATGCAGAGAAGAGCTGATGGTTGCCTGTTCCGTAATGGTAAAGTTACAATTTTCTTCCGAGTTGGAATGAAGAATTTGTATTTTGACTCTGTTTGGCGGAGAGCAGTGGTGGACTGTAATGTTTAATGTTATGTTATTTATAGACACTACGGGGCAGGACAACATAGTTAAGGGTTTTGGGGGAGACAACAAAAAGAGAAGTTAAGTGTGTTGAAATGCATGTGTGAAGTGCAGGGAGAGTACTGGAGGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_06423446_06426296.mRNA True 2072 mRNA 0.42 6 6423446 6427608

Neighbor

gene id symbol gene type direction distance location
CI01000021_06411964_06421511 NA coding upstream 1935 6411964 ~ 6421511 (+)
CI01000021_06408474_06411089 NA coding upstream 12357 6408474 ~ 6411089 (+)
CI01000021_06266751_06267607 NA coding upstream 155288 6264966 ~ 6268158 (+)
CI01000021_06077681_06095590 NA coding upstream 327720 6077409 ~ 6095726 (+)
CI01000021_06069397_06074082 FBXO30B coding upstream 349297 6069242 ~ 6074149 (+)
CI01000021_06427686_06431101 NA coding downstream 78 6427686 ~ 6431753 (+)
CI01000021_06746518_06768316 CPEB2 coding downstream 318910 6743219 ~ 6771079 (+)
CI01000021_06773262_06780081 NA coding downstream 345654 6773262 ~ 6780081 (+)
CI01000021_06786996_06789224 C1QTNF7 coding downstream 359253 6786861 ~ 6790962 (+)
CI01000021_06798250_06824148 CC2D2A coding downstream 370642 6798250 ~ 6824486 (+)
G119554 NA non-coding upstream 21934 6401151 ~ 6401512 (+)
G119426 NA non-coding upstream 89860 6329280 ~ 6333586 (+)
G119424 NA non-coding upstream 99721 6318726 ~ 6323725 (+)
G119431 NA non-coding upstream 120872 6301508 ~ 6302574 (+)
G119456 NA non-coding upstream 211372 6211630 ~ 6212074 (+)
G119534 NA non-coding downstream 11359 6438967 ~ 6441879 (+)
G119567 NA non-coding downstream 26433 6454041 ~ 6454265 (+)
G119570 NA non-coding downstream 28160 6455768 ~ 6456020 (+)
G119573 NA non-coding downstream 30798 6458406 ~ 6458691 (+)
G119577 NA non-coding downstream 49168 6476776 ~ 6476999 (+)
CI01000021_04886787_04893309 PLAGL2 other upstream 1533938 4886337 ~ 4893474 (+)
G117493 NA other upstream 2387770 4033000 ~ 4035676 (+)
G117484 NA other upstream 2465694 3956146 ~ 3957752 (+)
G117202 NA other upstream 3095213 3269144 ~ 3328233 (+)
G117237 NA other upstream 3180082 3237854 ~ 3243364 (+)
G119701 NA other downstream 372536 6800144 ~ 6860606 (+)

Expression


Co-expression Network