CI01000021_06427686_06431101


Basic Information

Item Value
gene id CI01000021_06427686_06431101
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000021
NCBI id null
chromosome length 7014339
location 6427686 ~ 6431753 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000021_06427686_06431101.mRNA
ATGGCAAACCAGATATTACCTGCTTTTCCAGAATTAGTTGTGCATGAGGACCACAGCTCTGTAGGTGTAAGATGGAAAAAATGGCTACAACGGTTTGAGAATTTTCTACTGGCCATGGACATCAAAGATGACAAGAGGAAATGGGCTCAGAAAGCTGGAGAATCGCTTGACGCTTATCATACAAGGCTGAGACAATTAGCTGCAATGTGCCAATTCACTGACATTGACAGAGAGATCAAGACTATGATTATTCAAACGTGTAGCCTACATCAAGGGAGATCGTGCCCAGCAAAAGGTAAAATACGCCATGCATGTGGAAAGCAAGGGCATTTTGCTAAATGTTGCTGTTCAAAGCCACAGGGAGGCGCCAAAACCAAACGACAACTTCATTTGGTTCAAGCTGAGCCAGCTGTTACATCTGAAGAGGCATACCTTTACACAATTTCAGATGGAGGAAGTACCACATTACTTAGCTACGATACTGCTTCTCAGCTAGGTCTTATCAAAGTAGTGAACAGAGTGCAGTCCAAACAAGACGTGAATGTGCAAACTCCTCAGGTGCCTATTCGCATTCCCCACAACATACCCAATGTGAACTGCCTTCTTGCTGAGTACGATGACCTCTTCCAAGGCGTTGGCAAACTGAAGGACTTTCAAGTTAAACTTCACATCAATAAATCACACCAATACACATTCTCTGATGGAGGCTTCTCACCTGACCTTACAAAGCTCAAAGCACTTCAAGAGGTTGTTTCATCCAAAAACGTCAATGAACTGCGGAGTTTACTTGGCATGACAAACTACAGTGCTCGCTTCATCAAAGATTCTGCCTCCATTACGCAGCCACACTCAGCACACAATCTGGACATGTTTACTCTGGTAACTGATCACAAACCCCTTGAATGGATATTCAACAATCCAAAGTCAAAGCCACCTGCTAGGATAGAAAGGTGGAGTCTCCGGATGCAATCATATAATTTCATCGTTCAGTATAAGTCAGGAAAGGATAACCCTGCAGACTACATGTCTCGCCACCCCCTACAATATACTTCTACCTCACAATCAAACGTGGCTGATGAGTGTGCTGAGGATTATGTAAATTTCCTTGCTGCCATTGCTGTGCCGAAGGCCATGACGCTACAGGAAATACAACTCGCCAAAAAGAATGATGTGACCCTCTCTAAAGTTGCAGAACTCATCAAACATGGTGGGAGATTACTTCTTGTCGTGATTGATGAATATTCCAGGTATCCTGAGGTTGAGATTGTTCAGTCCACATCAGCTAAAAGTACCATTCCTAAGTTAGATAAGATTTTCTCATCTTTTGGTGTGTCTTCGGAAGTAAAAACGGACAATGGCCCACCTTTTAATGGACATGATTTTGCTGATTTTTCCTCATATTTAGGGTTCAAACACAGGAAAATCACCCCACTATGGCAGCAAGCAAACGCGGAAGCAGAGTGGTTTATGCGGATGCTGGAGAAAGCCATTCAAGCAGCTCATGTGGACAATTTACCATGGAAGCAAGTTTTGTACACTTTCCTTCGCAATTATCGTGCCACCCCACATTGTTCAACAAAAAAGTCACCTGCTGAAGCTTTGTTTGGAAGGCCCATACGCACGAAGCTACCTGAGCTGACATGTTTCGTCATACAGATGCTGCAGCAAAAGAAAAAATGAAATGGCAAAAAATGAGATGACGCCAAACCTTCAAACCTAAAGGTGGATGACATTGTTCTGTGTCGACGACAGAAGAGTGGGAAGCTCAGTTCAGCTTTTGAACCTCAGCCATACAAGGTGATTTCTGTAAAAGGGCCAGTGATCACAGCAGTCTCTGGCACTCGTAAGATCACAAGAAATCCATCACACTTCAAAGTTCTGTGTTCCTCAAAAATTCACACAGAAGGAAAAGAATAGGGAAGTAAAATGGATGATGGCTGGGAATTAAATATTCCAGGTCAAACCAAAACAGTAACACCAGCAACACCGCTTTCATCAGCAGCTGGTCTACAGTCACAGACTTCAGAGGTCAGAAGATATCCACAGAGAGAGCACAGAGGACCTCCAAGATGACTAGCAGATTATGAAATCCACAATTTATAAATTGAGGAACTCTTTGGATACTGAGTAAAATGTTCAATGTTCACTGTTAATGTTTATTTGATTCATATGAAAATATCTGAAGGTGAAGAGGATTGTAATGTTTAATGTTATGTTAATTATAGACACTAGGGGGCAGGAAAACATAGTTAAGGGTTTTGGGGGAGGCAACAAAAAGAGAAGTTAAGTGTGTTGAAATGCATGTGTGAAGTGCAGGGAGAGTACTGGAGGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000021_06427686_06431101.mRNA True 2332 mRNA 0.43 6 6427686 6431753

Neighbor

gene id symbol gene type direction distance location
CI01000021_06423446_06426296 NA coding upstream 78 6423446 ~ 6427608 (+)
CI01000021_06411964_06421511 NA coding upstream 6175 6411964 ~ 6421511 (+)
CI01000021_06408474_06411089 NA coding upstream 16597 6408474 ~ 6411089 (+)
CI01000021_06266751_06267607 NA coding upstream 159528 6264966 ~ 6268158 (+)
CI01000021_06077681_06095590 NA coding upstream 331960 6077409 ~ 6095726 (+)
CI01000021_06746518_06768316 CPEB2 coding downstream 314765 6743219 ~ 6771079 (+)
CI01000021_06773262_06780081 NA coding downstream 341509 6773262 ~ 6780081 (+)
CI01000021_06786996_06789224 C1QTNF7 coding downstream 355108 6786861 ~ 6790962 (+)
CI01000021_06798250_06824148 CC2D2A coding downstream 366497 6798250 ~ 6824486 (+)
CI01000021_06906415_06933563 NA coding downstream 474662 6906415 ~ 6934141 (+)
G119554 NA non-coding upstream 26174 6401151 ~ 6401512 (+)
G119426 NA non-coding upstream 94100 6329280 ~ 6333586 (+)
G119424 NA non-coding upstream 103961 6318726 ~ 6323725 (+)
G119431 NA non-coding upstream 125112 6301508 ~ 6302574 (+)
G119456 NA non-coding upstream 215612 6211630 ~ 6212074 (+)
G119534 NA non-coding downstream 7214 6438967 ~ 6441879 (+)
G119567 NA non-coding downstream 22288 6454041 ~ 6454265 (+)
G119570 NA non-coding downstream 24015 6455768 ~ 6456020 (+)
G119573 NA non-coding downstream 26653 6458406 ~ 6458691 (+)
G119577 NA non-coding downstream 45023 6476776 ~ 6476999 (+)
CI01000021_04886787_04893309 PLAGL2 other upstream 1538178 4886337 ~ 4893474 (+)
G117493 NA other upstream 2392010 4033000 ~ 4035676 (+)
G117484 NA other upstream 2469934 3956146 ~ 3957752 (+)
G117202 NA other upstream 3099453 3269144 ~ 3328233 (+)
G117237 NA other upstream 3184322 3237854 ~ 3243364 (+)
G119701 NA other downstream 368391 6800144 ~ 6860606 (+)

Expression


Co-expression Network