Gene
RNA
| Item | Value |
|---|---|
| gene id | G117493 |
| gene name | NA |
| gene type | unknown |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000021 |
| NCBI id | null |
| chromosome length | 7014339 |
| location | 4033000 ~ 4035676 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU133514 | True | 492 | TUCP | 0.57 | 2 | 4033000 | 4035676 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000021_03793387_03846383 | NA | coding | upstream | 186617 | 3793387 ~ 3846383 (+) |
| CI01000021_03640760_03747887 | LAMA5 | coding | upstream | 285113 | 3640760 ~ 3747887 (+) |
| CI01000021_03617827_03624592 | MAPRE1B, MAPRE1 | coding | upstream | 408096 | 3617827 ~ 3624904 (+) |
| CI01000021_03594629_03615777 | PRKCBP1L | coding | upstream | 416671 | 3594629 ~ 3616329 (+) |
| CI01000021_03562381_03570309 | NA | coding | upstream | 461728 | 3562287 ~ 3571272 (+) |
| CI01000021_04087145_04091630 | NA | coding | downstream | 50298 | 4085974 ~ 4091826 (+) |
| CI01000021_04219242_04237829 | NA | coding | downstream | 183511 | 4219187 ~ 4238007 (+) |
| CI01000021_04259458_04263656 | NA | coding | downstream | 223481 | 4259157 ~ 4264106 (+) |
| CI01000021_04436103_04476829 | OPRL1 | coding | downstream | 400151 | 4435827 ~ 4477311 (+) |
| CI01000021_04576127_04585164 | NA | coding | downstream | 540451 | 4576127 ~ 4585311 (+) |
| G117492 | NA | non-coding | upstream | 31877 | 3999023 ~ 4001123 (+) |
| G117471 | NA | non-coding | upstream | 101310 | 3927839 ~ 3931690 (+) |
| G117431 | NA | non-coding | upstream | 106399 | 3914686 ~ 3926601 (+) |
| G117329 | NA | non-coding | upstream | 346731 | 3684236 ~ 3686269 (+) |
| G117366 | NA | non-coding | upstream | 495618 | 3536369 ~ 3537382 (+) |
| G117556 | NA | non-coding | downstream | 108825 | 4144501 ~ 4144835 (+) |
| G117564 | NA | non-coding | downstream | 127659 | 4163335 ~ 4163560 (+) |
| G117566 | NA | non-coding | downstream | 128659 | 4164335 ~ 4164600 (+) |
| G117568 | NA | non-coding | downstream | 135290 | 4170966 ~ 4171179 (+) |
| G117580 | NA | non-coding | downstream | 168239 | 4203915 ~ 4204151 (+) |
| G117484 | NA | other | upstream | 75248 | 3956146 ~ 3957752 (+) |
| G117202 | NA | other | upstream | 704767 | 3269144 ~ 3328233 (+) |
| G117237 | NA | other | upstream | 789636 | 3237854 ~ 3243364 (+) |
| G116236 | NA | other | upstream | 1735805 | 2289817 ~ 2297195 (+) |
| CI01000021_01332646_01333910 | NA | other | upstream | 2698591 | 1331665 ~ 1333951 (+) |
| CI01000021_04886787_04893309 | PLAGL2 | other | downstream | 807057 | 4886337 ~ 4893474 (+) |
| G119701 | NA | other | downstream | 2764468 | 6800144 ~ 6860606 (+) |
