CI01000024_00825386_00837898


Basic Information

Item Value
gene id CI01000024_00825386_00837898
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 824968 ~ 838550 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000024_00825386_00837898.mRNA
AACTGCATGCACCCCGTACTTGACCATACATGCTCTCATGTAACAATTCAGTAAATGTACATTTCCACTGAATGGTGTAAGCCATTTTCTAAAAACTGATGTGCATCTAATAATTAGAGTCTAATGCATAACCTTAAGAGCGATGTGCATATATAGGACACTCACAAAATGGGTCTTTCAAGCTTAAAAGACCATCTTAGACTGTAATGATTTTCCATTGGTATTAGCTTCTTAACCAACAAGACTTCCTTTGTCATACTGCTCCACCCAAAATACTGGATGATAAAGAAAGTCTTGCTGGTTAAGAAGCAAGTTCTAAAGCTTGTGGGGATGCCAACACACTAGCTTCCCATCCAGAACACAACATATGCTGATGGCCAGCAAAGGTCAAAGTGAACATATGGGAAATCTGTATGTTCTGAATGGTTGTCCACTTAATATTGTACCAGTTTTGTAGAAATTTGTATTAATCATCATTTAAAATGATGCACTTTTGCATCAAATGCAAGACATTTCATTTGCACACAAGTAAATTAAATAATGTTCTGTACTGTCTGAGTTTAGATTAGAAGTACCAAAAATGTAAACCTCCAAAAGTATGGATTATGTTTAGTGAGATCTGTCTGGCAAAGTTGCCACAGATGAATTTGAAATGGCCTATAGCACAAATAAGGAGGATCTTGAGAATGGTGAAGATGTGGCCACCTGTCCGAGCTGTTCACTAATAGTTAAAGTAATCTATGATAAGACTTGGGTCGGTCTATCATGTCCTGTCTTAGACTGGTTCAGATCCTACTTAAGCAACAGGGAATACTATGTTACACTGGGTACCTACACCTCAATGCATTACGTCATTTCTTGTGGCGTTCCTCAAGGCTCAATTTTGGGTCCTCTATTATTTAACCTACACATGCTTCCTTTAGCTGGTGTAATTAACCAGTACAAAATTTCATTTCACAAGTACGCAGATGACGCTCAACTCTATCTTTCACCTGCACCAGATGCCCACAATTCAATTTCCACACTTCTGGACTGCATAAAATTTTGGATGTCCCAGAACAGCTAAACAAAGAACTTAGAAATCATGTTTGACAGTGACCTCATTTAAAAAAAAAAAAAAAAAACATATTAGCATTGTTACTAAAACGGCATATTATCACCTCAGAAACATCTCCAGAGTATGTGACATGCTCTCCCCTTCTGACAATGAGAAACTTGTTCATGCATTTGTTATGTCTAGTCTTGATTACTGTAATAGTGTTTTTGCTGGGTTACCAAAGAGCTCTATTAAACACTTACAAAGAGTTTAGAGTGCAGCTGCACGAATGCTAACTCGCTCTAAAACTAGAAATCACATTACTCCAACTCTCAGATCCCTTCACTGGCTGCCTTTATCATTCAGAATTGAATTAAAGATCCTCTTGTTAGTTTTTAAATGTCTTCATGGAACTGCCCCAGTAAACCTTTCTAATTTGTTGAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000024_00825386_00837898.mRNA False 1484 mRNA 0.37 3 824968 838550

Neighbor

gene id symbol gene type direction distance location
CI01000024_00766380_00783144 NCK2B, NCK2 coding downstream 40712 765081 ~ 784256 (-)
CI01000024_00758857_00762162 NA coding downstream 61189 758598 ~ 763779 (-)
CI01000024_00747057_00748859 ECRG4B coding downstream 76109 746731 ~ 748859 (-)
CI01000024_00697714_00714666 TMTOPS2B, TMTOPS2A coding downstream 109655 697376 ~ 715313 (-)
CI01000024_00479343_00529567 IQCA1 coding downstream 295401 479296 ~ 529567 (-)
CI01000024_00871953_00893156 MRPS9 coding upstream 33139 871689 ~ 893156 (-)
CI01000024_00913269_00915063 POU3F3, POU3F3A, POU3F3B coding upstream 74302 912852 ~ 915565 (-)
CI01000024_00931895_00936667 NA coding upstream 93192 931742 ~ 936831 (-)
CI01000024_00955186_00965837 NA coding upstream 116167 954717 ~ 966070 (-)
CI01000024_01258292_01261764 NA coding upstream 418729 1257279 ~ 1262033 (-)
G121399 NA non-coding downstream 167221 657431 ~ 657747 (-)
G121398 NA non-coding downstream 168358 656400 ~ 656610 (-)
G121397 NA non-coding downstream 169468 655266 ~ 655500 (-)
G121376 NA non-coding downstream 180275 625239 ~ 644693 (-)
G121412 NA non-coding upstream 145 838695 ~ 842019 (-)
G121415 NA non-coding upstream 7444 845994 ~ 848462 (-)
G121423 NA non-coding upstream 35877 874427 ~ 905944 (-)
G122859 NA non-coding upstream 542878 1381428 ~ 1385325 (-)
G122860 NA non-coding upstream 606036 1444586 ~ 1452856 (-)
G123233 NA other upstream 1708910 2547460 ~ 2555036 (-)
CI01000024_03938368_03941795 NA other upstream 3097492 3938315 ~ 3941924 (-)
G125457 NA other upstream 6518687 7357237 ~ 7358104 (-)
G125798 NA other upstream 7137117 7975667 ~ 7976047 (-)
G121394 NA non-coding downstream 185305 638002 ~ 638428 (-)

Expression


Co-expression Network