CI01000024_00871953_00893156 (MRPS9)


Basic Information

Item Value
gene id CI01000024_00871953_00893156
gene name MRPS9
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 871689 ~ 893156 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000024_00871953_00893156.mRNA
GATGTGATGTAGTCATCACTTCCTGTCTGAGCGCGAGTCGGCGAGCAAACATGGCTGCCTCCGGTTGCAGAGGCATGAGATCGATTTTATGGAAGTATGGGAGCTGCGGGAAGAGTTTGTGTGTGTCCCGATCAAAGACGGCTCTGCAGCTGCCGGTCAGGCAGATTTGTGTGTCGTCCTCTTTGTGGAAGAAGAACCTGGCAGCGGCAGGCCCAGAGAAATTCACACAGGAGTTCATCAATAAACAGGTGGAGGATTTTGAAGTCGGTAAACGTCACTTGGCCAACATGATGGGGGAGGACCCAGAGACATTTACACAGGAGGATATTGATAGGAGTATTGCATACCTCTTCCCCTCTGGACTCTTTGACAAGCGAGCAAGACCTATAATGAAGCACCCAGAGCAAATATTCCCAAAACAGACAGCTGTCCAGTGGGATGCAGAAGGACGGCCTTTCCACTTTTTGTTCTACACAGGGAAACAGTCCTACTATTCTCTCTTGCATGATCTGTATGAGAAGATTCTGGCCATAGAGAGACATCAGGACGAGATGAGAAATAAAGGTCTATATACAACAGATACCAAACAAATCATGCTGACTGGGAGCAGGTGGCTGTTAAAAGAGGAAATGGAGGAGCATCTGGTAGAGAACATTTCAGATCAAGATTACATGCGGTTGATCCAGCTGATGGAGAGGTTGTTGTCCATGCCCTACTGCTCTCTGGAGGAGGAGTTCGTGCTGAAGTTTCGCAGGCATCTGGAGGTTCAGTCCAGTAAACAGGAGATTCCTGTGATACAGTACGATCCACAGGGAGTCGCTTTCAGCGTTGCTGATGGCAGAAGAAAATCTGCCAAAGCCAGTATCACCCTCAGAGACAGCGGCTCTGGGAACGTCACAATCAACGGCAAGAACTACCTCCACTACTTTCCCGTACTACAAGACAGGGAGCAGCTGTTGTTTCCTCTGCACTTTGTGGGCATGCTGAGCCGGTTTGACATCGAGGGCAGTGTGGAGGGCAGCGGTCACTCTGCTCAGGCTGGCGCTCTGCGATTGGCCATCTCACGGGCGCTGCTCAGCTTTGTGTCTGAGGTAGAAGTGGAAAAGATGAGGCAAGCTGGCCTGCTGACCGCTGATCCCAGGATCAAGGAGAGGAAGAAACCAGGGCAGGAAGGAGCACGGAGAAAGTTCACGTGGAAAAAGCGCTGAACAGGAAAGGGGGCAATGCAGCACTGGAACCCTGAAAGAGGACACAACTTCTTTTTCACTGGATTATTGGCTTTTTTTCATGGACAACTGCTGATCACAGACTTAAACCAGCCCTTTCATCAGTTAAAAATGATAAAATATATCGCTGTTGGACATCCGTGAGCTGAAAGGAAACCTTTCTGTTGCTGACATTTAATTGTCCTTTTCTGTGCATTGTGTATATTGATGTTGTTGAAAATGTTAATATAAACATTTTTCAATAAA

Function

symbol description
mrps9 Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Orthologous to human MRPS9 (mitochondrial ribosomal protein S9).

GO:

id name namespace
GO:0003735 structural constituent of ribosome molecular_function

KEGG:

id description
K02996 RP-S9, MRPS9, rpsI; small subunit ribosomal protein S9

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000024_00871953_00893156.mRNA True 1472 mRNA 0.48 11 871689 893156

Neighbor

gene id symbol gene type direction distance location
CI01000024_00825386_00837898 NA coding downstream 33139 824968 ~ 838550 (-)
CI01000024_00766380_00783144 NCK2B, NCK2 coding downstream 87433 765081 ~ 784256 (-)
CI01000024_00758857_00762162 NA coding downstream 107910 758598 ~ 763779 (-)
CI01000024_00747057_00748859 ECRG4B coding downstream 122830 746731 ~ 748859 (-)
CI01000024_00697714_00714666 TMTOPS2B, TMTOPS2A coding downstream 156376 697376 ~ 715313 (-)
CI01000024_00913269_00915063 POU3F3, POU3F3A, POU3F3B coding upstream 19696 912852 ~ 915565 (-)
CI01000024_00931895_00936667 NA coding upstream 38586 931742 ~ 936831 (-)
CI01000024_00955186_00965837 NA coding upstream 61561 954717 ~ 966070 (-)
CI01000024_01258292_01261764 NA coding upstream 364123 1257279 ~ 1262033 (-)
CI01000024_01405425_01412752 PTPRNB, PTPRN coding upstream 511919 1405075 ~ 1412752 (-)
G121415 NA non-coding downstream 23227 845994 ~ 848462 (-)
G121412 NA non-coding downstream 29670 838695 ~ 842019 (-)
G121399 NA non-coding downstream 213942 657431 ~ 657747 (-)
G121398 NA non-coding downstream 215079 656400 ~ 656610 (-)
G121397 NA non-coding downstream 216189 655266 ~ 655500 (-)
G122859 NA non-coding upstream 488272 1381428 ~ 1385325 (-)
G122860 NA non-coding upstream 551430 1444586 ~ 1452856 (-)
G122923 NA non-coding upstream 598695 1491851 ~ 1492211 (-)
G122926 NA non-coding upstream 608419 1501575 ~ 1505218 (-)
G122981 NA non-coding upstream 719680 1612836 ~ 1613067 (-)
G123233 NA other upstream 1654304 2547460 ~ 2555036 (-)
CI01000024_03938368_03941795 NA other upstream 3042886 3938315 ~ 3941924 (-)
G125457 NA other upstream 6464081 7357237 ~ 7358104 (-)
G125798 NA other upstream 7082511 7975667 ~ 7976047 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_031928 mrps9 coding NC_007117.7 CM002890.2 14980761 ~ 15029092 (+)