G122859


Basic Information

Item Value
gene id G122859
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 1381428 ~ 1385325 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU139514
ATCTGTTTATGGACGTTTATTTATCCTGTACCTTGTAGTTTAGAAAATACAGATCTGTAATTGTACACCAAAACTGTACTTGAAAATTCTTAATGAAAGAAATTGTCTTCAAAAGACAATGAAACAACAGTTTTATCCACAGTGAAACAGAACTAGGGGTCTGTTGTACCCAGTACAGACAAGCAAGGTTGACAGTGAAGGTGGAAAGAGCTAGGGGGATTCATGCCATGCTTGTTTACTACTGAACAGTGATCAGATGGCCTTGCTGTAATCCTTTGGTAAACAGTTAAAGGTCGCACAAGCATGACAGATCCTGAATCAGTAATCAGGCCTTTTCAGCCTCGATTTCCCCCTATATCAAGAGCTGGCTTTCAATTTCACACACACCACTGTACAAAAAGAACAGATTAGAAGTGATAAAAGTCTGTTGTACAGCTTATACAATGCAATTCAATTCTGCTTTTGCAAAAATATACTCATAATATACATAGATTTCACTTTTCAATTCCCCTGCACTCTTTTTGCCCATTCTACCCCGCCCCATATCCATAAAAATCACATTACAAAAGCAGTTGAAATAACCATTTCTGAACAGTTATAAAGCATTTTACTTGGCCAGCTGGAGAAAAATTGTGCATTTTTCCAGATTATAATCAAAGCTATATACACTCTGATAATGACAACAGCCTGAGGTGCATCATTATGCATTGTCAGAAGTCTAAAAATCTCACTGAAGCAGAGCATTAAAAAAAAGACACCAGGCCCAATACACAAAGAAAGCAGTGCACAAAAGCCATATTTTAAAATATACACTTATTTATATATCTATATATATAAAATCAAAGGTTATACTGAAAAATACTGTTGTGTCCCTTTACGTTTTTTTTGTTTTGTTTTTTTGTTGGTAAATTTAAAAAAGCAGACATTTTTCCAACCTGTGTAAGTAACAAACAAATGAACAATAAAAATGTGGCAAGAAAGTCTAGAGACTTTTCAGCAGGCTTTACAGATTCTTCATTGGAGCGATTACAGTTTGACATGAGCTGCATTTGGAGTGTGAGGATGCATTTTAGAGTTCTGGTCCGCTCGGCGGTAGTGAAGCAGTTCAGAAAGCGTAATTTTCAGGAAAGGACGGCCCAACTAAGCACTGGTCCCTGGCTTCTGCTGGATAACTACAGCTTCTGTTAGTCTCATCAAAGTGTGAGAGTGGAACAGTGTCATCCTCAGGAACCTGCAGCCCGTCGGGGTCTACCTTCAGACTGGGCCTCTGGTTGTCAGGGAATGCCATAGAGAAGAGCGCATCGGGATCACACACAAACTTATACACGTACCGCTCTCCAGCAACCTTCTGCATGATGCCCTTCTCATAGTAGTAACGCAGGGAGCGGCTCAGCTTGTCATAATTCATCGCAGGCCTGTTCTTCTGGATACCCCAACGGCGAGCAACCTCCTCTGGTTCAATGAGTTTAAACTCGAGCCCACGGCCAGTCCAAGCAATGAAGTGGCTGTTGGATGGGTCGTCCAGCAGAGTGACCAGAAACTGCCAGAGTTGCAGAGACCCCCTTCGTTGATACGGAGGACCCTCCCGGAAAACTCCACCCTCCTGCTTCAGCTTTCCCTCCAGGCGGTCTGGGACCACACACGCATCATCATAATAGAGGTGGGATTCTCCATCATACCCAAAACCCTCGCTGTTGGTGCCATAGAAATTTGTTGATTTCCCAAAAGATGACTGGCAATTCTGTACTTCTGAGTCAAAGCCGAAGTCTCTGGGCTCTTGTTTGATTGACAGTTGGTGGATCAATGGTGCACGAGGAGGTCCCATGTTTTGCACACCCTGCTCATTGTAACGAGGATCCACCATTTCCTTTTTGAATCCCTGCGGAGGCATTGGCACCAATGGCTCTGACATCTGCCGGTGATAAGGGGGGCGGCTATGTCGGGGAAAATGGCCACGGTTCTGTGGGGGGTAAGGTGTCTGACAACGGCCATCGGACTGTGGGAACGGCAGACAGGGCTCGGAAAGCTGCCGATGGAACCTGTGGTCTGTGCTGTAGGAGGCGTCTGGGTGATTGACAGGTGGGCAGGGCACAGCAAAAGGTGGGCTTTGACTGTGGAGTGGAGTCTGTGCTGTCTGATGTGGTGGGGTAGAACTGTGGTTGTGGACAGGTAGAAGTGGCAGTCCTTGTGTCTGAGTTTGGGCTGGTGGCATCGCTCTTTTTTGCACATGATGTGTTGCTGTGCTGGTGGAGGAGCCGAAGGGTGATGCCGGTGTAGAAGGAGGAGTCAGTGGCTTGTTGAAAGAAAATGGCTTTCTGTCG

Function

NR:

description
PREDICTED: mitogen-activated protein kinase kinase kinase 19-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139514 True 2321 lncRNA 0.45 6 1381428 1385325

Neighbor

gene id symbol gene type direction distance location
CI01000024_01258292_01261764 NA coding downstream 119395 1257279 ~ 1262033 (-)
CI01000024_00955186_00965837 NA coding downstream 415358 954717 ~ 966070 (-)
CI01000024_00931895_00936667 NA coding downstream 444597 931742 ~ 936831 (-)
CI01000024_00913269_00915063 POU3F3, POU3F3A, POU3F3B coding downstream 465863 912852 ~ 915565 (-)
CI01000024_00871953_00893156 MRPS9 coding downstream 488272 871689 ~ 893156 (-)
CI01000024_01405425_01412752 PTPRNB, PTPRN coding upstream 19750 1405075 ~ 1412752 (-)
CI01000024_01423879_01438170 DNPEP coding upstream 38366 1423691 ~ 1438170 (-)
CI01000024_01455583_01465466 TMEM198, TMEM198B coding upstream 70070 1455395 ~ 1465577 (-)
CI01000024_01517836_01518771 CDK5R2A, CDK5R2 coding upstream 131194 1516519 ~ 1519206 (-)
CI01000024_01521726_01530789 WNT6A coding upstream 136197 1521522 ~ 1530789 (-)
G121423 NA non-coding downstream 475484 874427 ~ 905944 (-)
G121415 NA non-coding downstream 532966 845994 ~ 848462 (-)
G121412 NA non-coding downstream 539409 838695 ~ 842019 (-)
G121399 NA non-coding downstream 723681 657431 ~ 657747 (-)
G121398 NA non-coding downstream 724818 656400 ~ 656610 (-)
G122860 NA non-coding upstream 59261 1444586 ~ 1452856 (-)
G122923 NA non-coding upstream 106526 1491851 ~ 1492211 (-)
G122926 NA non-coding upstream 116250 1501575 ~ 1505218 (-)
G122981 NA non-coding upstream 227511 1612836 ~ 1613067 (-)
G122864 NA non-coding upstream 273428 1658753 ~ 1788836 (-)
CI01000024_00825386_00837898 NA other downstream 554577 824968 ~ 838550 (-)
G123233 NA other upstream 1162135 2547460 ~ 2555036 (-)
CI01000024_03938368_03941795 NA other upstream 2550717 3938315 ~ 3941924 (-)
G125457 NA other upstream 5971912 7357237 ~ 7358104 (-)
G125798 NA other upstream 6590342 7975667 ~ 7976047 (-)

Expression


Co-expression Network