G122860


Basic Information

Item Value
gene id G122860
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000024
NCBI id null
chromosome length 8644187
location 1444586 ~ 1452856 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU139518
GAATGTGTTGGTTTAGGTATCTTTATTTATTATGCTTGGTACCATCCTCCATTTTGTTAGCCTAGTCTGTTTTGCGCCTCTCTCCATTTACTGCACTCAACCTCCTTTAATATTTCCGTCATTCTTTTACTTTATTTGAAACTTAAAGTTTAATCTTTCTTATCTTACATCTTTCCAAATTGACATAGCTACTGGACTTATTAAAATACAGATTTGAAAAGAAAGTGATCTCTCTCTCTTCTCCCACTCATGCAGATGTGCTCATATCACTTTTAGGATGTGTGGAGGCAGAAAAATACAGAATATAATTAACTGTCCTAAAGGTTTTATTCTCAACTTTGTTTGATTCTTTAGTTGCAGCTCCTCGTCCGAGGTTTACATGATGTCCTGCTGGTGCTGCGTAGATTCACTCACCACCTCTCCGTCACGCGTCTCGATGGTCTTGATCAGGACAGTTTTCTTTGAGTGCATTTCAGATGCTCTCTGTTGGTGCTCTGGACTCGTCTCTCTAAAGCTTAAAGTGGAATACGACTGCATGGGCATCACAATCCTGCTCTCCTCTCCTTCCAACAGCTTCCTATAGGTGGCGATCTCCACATCCAGGGCCATCTTAATGTTGAGCAGGTCCTGATATTCTCGAAGGTGACGCGCCATCTCGTCCTTCATGTTCGCGATCTCCGCCTCCAGCCTGGCGATGGTGTCCTGGAAAGCATTGGCCTCACGACCGTGACGATCCTCCATATCTCTCATCTGCCTCATGAGAGACTCGTTCGTGCCCTTGAGGGAGTCGATCTCACAGGTGTAGGACTGGATCTGGTGTCTGTACTCCATGGACTCCAGCTTGGATTGTTTGAGAGCCTCATTGTTCTTGCTCACTGCCTGGTTGAGGTCTGACACCTTTGACTTGTACCAGTCCTCGGCCTCTGCGATATTCTTCGCAGCGATGCCCTCATACTGAGCACGGATGTCCCTCAGGGCAGCAGTCAGGTCTGGTTTGGACATGTCCATCTGGATCTGGACTTGGGTCTCTTGCATCTGGGCCTGCAACTCACGGATTTCCTCCTCGTGGATCTTCTTGAGGAAGGCGATCTCTTCCTGGAGAGTCTCTACACGTCTTTCCAGATCCAGGCGGGCCAAAGTGGCAGCATCCACGTCTGCTCTGAAAGCAGACAGATTATTCTCTGCCTCCTCCCTCAGTGCAATCTCTTCCTGAAGCCTGGCTTTCAGTTTCTGCAGGTCATCTGCCAAGTTGTCCCGCTCCACCTCCACACGTGATCTGTGATTGGTCACCACTTCGATCTCTCTCCTCAACTCCCTCATCTCATCCTCGTACAGGTCGGCGATGCGTGTGGGCTCCCGCCCCTTCAAACGCTCCACCTCAACCACCAGCACCTGATTCTGCTGCTCCAGCATGCGAACCTTCTCGATGTAGTTGGCGAATCGGTCATTTAGGTGCTGAAGCTCAGCTTTCTCATTAGTGCGTGTTTGGAGAAACTCCTGGTTGAGCGCGTCTGCCAGGCTGAAGTCCAGCGTCTCACCCATCCCACCATAGGAGCGGGTATAGCCCGCGGATAAGTTGGGCATACTGTAGGAGGAGGCTCGATAATTGGAGAATCCAGGAGAAGAAGTGGAGGACTTGGCGACCTCGTACACTCTGGAGCTGATCCTAGAGCTGCCGGACCCCCCGGTGGAGGCACGGCCAAACACAGAACGGGTCATTGGTGGCGTCAGGTAGCCGGGACCGCCGAACATTCGACGGTATGAAGAGGATGAAGAGGAGGCATAAGAGTGGCTCATGTTGGAGCACAAGAAGGACAGACCAGATGAATACAAACACCCTCCGGAGAGGACAGAGACAGAATG
>TU139516
GAATGTGTTGGTTTAGGTATCTTTATTTATTATGCTTGGTACCATCCTCCATTTTGTTAGCCTAGTCTGTTTTGCGCCTCTCTCCATTTACTGCACTCAACCTCCTTTAATATTTCCGTCATTCTTTTACTTTATTTGAAACTTAAAGTTTAATCTTTCTTATCTTACATCTTTCCAAATTGACATAGCTACTGGACTTATTAAAATACAGATTTGAAAAGAAAGTGATCTCTCTCTCTTCTCCCACTCATGCAGATGTGCTCATATCACTTTTAGGATGTGTGGAGGCAGAAAAATACAGAATATAATTAACTGTCCTAAAGGTTTTATTCTCAACTTTGTTTGATTCTTTAGTTGCAGCTCCTCGTCCGAGGTTTACATGATGTCCTGCTGGTGCTGCGTAGATTCACTCACCACCTGTAGGGGGCAGTAGAGAGTTTTAAATTCAAAGACAGTCTCTTCCTGTCACCAGGCAATTTGTGAGGAAATCACTACTGGTTTCTATTATTTCAGTACTTTAATCAAATATTTTGAAGTTGTATTGGAGTATTTGACCACAAAACTATCTTATCACCCTTTTGAGGTGATAGGCCTGAGGGAGAATGAACTTGGAAGACTATACTAAGGTGAACTGAAATGTTGGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGCATCAAACCTCTCCGTCACGCGTCTCGATGGTCTTGATCAGGACAGTTTTCTTTGAGTGCATTTCAGATGCTCTCTGTTGGTGCTCTGGACTCGTCTCTGTTGAAAATGATATTAATAAAAACATACACAACCATTTAAAGTTTGGGGTTAGTAAGATGTTTTTGAAACAAGTCTCTTAAGCTCACCGATGCTGCGTTTATTTGATCTAAAATACGGTAAAAAGGTAATGTTATTACAATTTAAAATAGGTTTTTTTAGAAAATAAAATATAAAAATGTAATTTGTTAATCCTGTAATTGCTAGGCTTCAGTGTCACATGATCCTGGCTTCAGAAATCATTGTAATATGCTGATTTTCTGCTCAAGAAACATTCTAGTAACACTTTACAATAAGGTCTCATTAGTTAACATTAGTTAATGCATTAACTAACATTAACTAATGAGTAATACATTTGTTACAGTATTTATTTTTCTTTGTTAACTTTAATAAAAAAGCCTACAACTGTTTGTTCAAGATAGCTCAGGTCCATTAAATAATATTAACAGATACAACATTTGATTTTATTAATGTATTAGTAAGTTATGAAATTAGCACCGACTAAGATTAATAAATGCTCTAGAAGCCA

Function

NR:

description
PREDICTED: uncharacterized protein K02A2.6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU139518 False 1863 lncRNA 0.50 9 1444586 1452856
TU139516 True 1309 lncRNA 0.34 2 1451524 1452856

Neighbor

gene id symbol gene type direction distance location
CI01000024_01423879_01438170 DNPEP coding downstream 6416 1423691 ~ 1438170 (-)
CI01000024_01405425_01412752 PTPRNB, PTPRN coding downstream 31834 1405075 ~ 1412752 (-)
CI01000024_01258292_01261764 NA coding downstream 182553 1257279 ~ 1262033 (-)
CI01000024_00955186_00965837 NA coding downstream 478516 954717 ~ 966070 (-)
CI01000024_00931895_00936667 NA coding downstream 507755 931742 ~ 936831 (-)
CI01000024_01455583_01465466 TMEM198, TMEM198B coding upstream 2539 1455395 ~ 1465577 (-)
CI01000024_01517836_01518771 CDK5R2A, CDK5R2 coding upstream 63663 1516519 ~ 1519206 (-)
CI01000024_01521726_01530789 WNT6A coding upstream 68666 1521522 ~ 1530789 (-)
CI01000024_01555879_01590626 ASIC4B coding upstream 103023 1555879 ~ 1591305 (-)
CI01000024_01630975_01637097 GMPPA, GMPAA, GMPPAA, GMPPAB coding upstream 178092 1630948 ~ 1637147 (-)
G122859 NA non-coding downstream 59261 1381428 ~ 1385325 (-)
G121423 NA non-coding downstream 538642 874427 ~ 905944 (-)
G121415 NA non-coding downstream 596124 845994 ~ 848462 (-)
G121412 NA non-coding downstream 602567 838695 ~ 842019 (-)
G121399 NA non-coding downstream 786839 657431 ~ 657747 (-)
G122923 NA non-coding upstream 38995 1491851 ~ 1492211 (-)
G122926 NA non-coding upstream 48719 1501575 ~ 1505218 (-)
G122981 NA non-coding upstream 159980 1612836 ~ 1613067 (-)
G122864 NA non-coding upstream 205897 1658753 ~ 1788836 (-)
G123003 NA non-coding upstream 216178 1669034 ~ 1676190 (-)
CI01000024_00825386_00837898 NA other downstream 617735 824968 ~ 838550 (-)
G123233 NA other upstream 1094604 2547460 ~ 2555036 (-)
CI01000024_03938368_03941795 NA other upstream 2483186 3938315 ~ 3941924 (-)
G125457 NA other upstream 5904381 7357237 ~ 7358104 (-)
G125798 NA other upstream 6522811 7975667 ~ 7976047 (-)

Expression


Co-expression Network